Job Description P76347 Confidence 96.03% Date Wed Jan 25 15:21:07 GMT 2012 Rank 27 Aligned Residues 133 % Identity 19% Template d1qjpa_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.65

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	D	E	R	T	Q	I	N	N	G	L	G	W	R	H	F	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N
Query Conservation
Alig confidence																											.	.										.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.										.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	L	G	A	G	A	.	.	F	G	G	Y	Q	V	N	P	Y	.	.	.	.	.	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q
Template Known Secondary structure				T	T																						.	.								T	T	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.										.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																				.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																			.	.												.
Query SS confidence																			.	.												.
Query Sequence		G	W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	.	.	G	K	L	V	Y	E	Q	Y	Y	G	D	.	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	E	N	D	T	R	F	A	V
Query Conservation																			.	.												.
Alig confidence																			.	.												.																																						.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	.	.	.	.	.	T	N	G	M	L	S	L
Template Known Secondary structure													S	S	S	S																			S	S	S																						T	T										.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150
		383	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	T	W	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	S	Y	R	F	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions