Job Description P76347 Confidence 96.38% Date Wed Jan 25 15:21:07 GMT 2012 Rank 23 Aligned Residues 138 % Identity 15% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

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		232	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		Q	I	N	N	G	L	G	W	R	H	F	.	.	.	.	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	T	V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	.	.	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure															T	T	T																T	.	.	T		S																	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.
Predicted Secondary structure																					.	.	.	.																																																				.
Query SS confidence																					.	.	.	.																																																				.
Query Sequence		D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	K	L	V	.	.	.	.	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	E	N	D	.	T	R	F	A	V
Query Conservation																					.	.	.	.																																																				.
Alig confidence																					.	.	.	.																						.																														.
Template Conservation																																														.
Template Sequence		G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V	V	G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N	D	T	S	D	Y	G	F	.	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	I	R	S	V	D	V	G	T	W	I	A
Template Known Secondary structure													T	T																			T	T	T											.										S	S	T	T													T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		383	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	T	W	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	G	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions