Job Description P76347 Confidence 90.67% Date Wed Jan 25 15:21:07 GMT 2012 Rank 48 Aligned Residues 193 % Identity 13% Template c3sljA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant Resolution 2.48 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																							.	.	.																					.	.	.	.
Query SS confidence																																																							.	.	.																					.	.	.	.
Query Sequence		I	T	L	G	V	D	E	D	F	S	L	K	N	S	Q	F	D	F	L	H	P	W	Y	E	T	P	D	N	L	F	F	S	Q	H	T	L	H	R	T	D	E	R	T	Q	I	N	N	G	L	G	W	R	H	.	.	.	F	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	.	.	.	.
Query Conservation																																																							.	.	.																					.	.	.	.
Alig confidence																.	.																																						.	.	.											.										.	.	.	.
Template Conservation																.	.																																																			.
Template Sequence		V	Q	V	G	V	D	K	K	H	E	L	D	G	L	.	.	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	S	G	A	Y	I	D	L	I	G	K	Y	V	.	H	H	D	N	E	Y	T	A	T	F	A	G	L
Template Known Secondary structure													T	T		.	.																		S	S																			T	T	S											.									S	S	T	T
Template Predicted Secondary structure																.	.																																																			.
Template SS confidence
		1063	.	.	.	.	.	.	1070	.	.	.	.	.	.			.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.		.	.	.	1130	.	.	.	.	.	.	.	.	.
								262	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	.	.	.	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.	.	.																			.	.	.						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.						.
Template Sequence		G	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	.	.	.	Q	F	A	W	K	.	D	Q	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V	D	V	G	K	S	F	S
Template Known Secondary structure																							S	S	S	S														B				.	.	.						.		T	T										B
Template Predicted Secondary structure																																												.	.	.						.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.				.	.	.	.	.		.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.
							319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.									.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	.	.	.	.	.	.	.	.	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	.	.	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	E	N	D	T	R	F	A	V	D
Query Conservation		.	.	.	.	.																								.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		G	K	D	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F	G	K	Y	N	V	D	N	A	V	N	A	N
Template Known Secondary structure			T	T															S											T	T																								T	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		1216	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.
		384	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	W	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1296	.	.	.	1300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions