Job Description P76347 Confidence 95.80% Date Wed Jan 25 15:21:07 GMT 2012 Rank 30 Aligned Residues 135 % Identity 14% Template c3qraA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis Resolution 1.80 Å

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		235	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		N	G	L	G	W	R	H	F	T	.	.	.	.	.	.	.	.	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	I	G	Y	A	Q	S	R	V	K	E	D	G	Y	K	L	D	K	N	P	R	G	F	N	L	K	Y	R	Y	E	F	N	N	D	.	.	.	W	G	V	I	G	S	F	A	Q	T	R	R	G	F	E	E	S	V	L	I	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	Y
Template Known Secondary structure														T	T	S			B														S	S	S	S	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.																	90	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.
Predicted Secondary structure																			.	.																																																							.
Query SS confidence																			.	.																																																							.
Query Sequence		W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	.	.	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	E	N	D	.	T	R	F	A	V	D
Query Conservation																			.	.																																																							.
Alig confidence																			.	.																																																							.
Template Conservation
Template Sequence		Y	S	V	T	A	G	P	V	F	R	I	N	E	Y	V	S	L	Y	G	L	L	G	A	G	H	G	K	A	K	F	S	S	F	G	Q	S	E	S	R	S	K	T	S	L	A	Y	G	A	G	L	Q	F	N	P	H	P	N	F	V	I	D	A	S	Y	E	Y	S	K	L	D	D	V	K	V	G	T	W	M	L	G
Template Known Secondary structure													S	S	S																																								S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		384	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	W	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions