Job Description P76347 Confidence 94.25% Date Wed Jan 25 15:21:07 GMT 2012 Rank 37 Aligned Residues 177 % Identity 12% Template c3pddA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:glycoside hydrolase, family 9; PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules Resolution 1.72 Å

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		430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																	.
Query SS confidence									.																																																	.
Query Sequence		L	V	R	L	T	L	T	.	D	P	V	T	G	K	S	G	E	V	K	S	L	V	S	S	L	Q	T	K	Y	A	L	K	G	Y	N	V	E	A	T	A	L	E	A	A	G	G	K	V	V	T	T	G	K	D	I	L	.	V	T	L	P	A	Y	R	F	T	S	T	P	E	T	D	N	T	W	P	I	E	V	T
Query Conservation									.																																																	.
Alig confidence									.																															.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	T	I	D	S	P	V	A	G	E	R	F	E	A	G	K	D	I	N	I	S	A	T	V	K	S	K	T	P	V	S	K	V	E	F	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	G	D	T	L	I	S	S	D	T	T	A	P	Y	T	A	K	I	T	G	A	A	V	G	A	Y	N	L	K	A	V
Template Known Secondary structure								S		T	T					T	T	S											S	S										.	.	.	.	.	.	.	.	.	.	.	.	T	T								S	S	S							S			S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.													.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	V	K	G	N	L	S	N	R	E	Q	S	M	V	V	V	Q	A	P	T	L	S	Q	K	D	S	S	V	S	L	S	T	Q	T	L	N	A	D	S	H	S	T	A	T	L	T	F	I	A	H	D	A	A	G	N	P	V	V	G	L	V	L	S	T	R	H	E	G	V	Q	D	I	T	L	S	D	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	S	D	G	R	R	I	E	S	P	V	T	P	V	L	V	K	V	I	V	K	P	T	V	K	L	T	A	P	K	S	N	V	V	A	Y	G	N	E	F	L	K	I	T	A	T	A	S	D	S	D	G	K	I	S	R	V	D	F	L	V	D	G	E	V	I	G	S	D	R	E	A	P	Y	E	Y	E	W
Template Known Secondary structure					T	T	S																											T	T				B	T	T	S											S	S	S										T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600					.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		D	N	G	D	G	S	Y	T	Q	I	L	T	T	.	.	.	.	G	A	M	S	G	T	L	T	L	M	P	Q	L	N	G	V	D	A
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		K	A	V	E	G	N	H	E	I	S	V	I	A	Y	D	D	D	D	A	A	S	T	P	D	S	V	K	I	F	V	K	Q	A	R	L
Template Known Secondary structure					S												T	T			B											B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions