Job Description P76347 Confidence 28.21% Date Wed Jan 25 15:21:07 GMT 2012 Rank 181 Aligned Residues 100 % Identity 19% Template c3p42D_ PDB info PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon Resolution 1.91 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Y	T	L	G	A	L	E	S	A	Q	S	V	A	E	R	F	G	I	S	V	A	E	L	R	K	L	N	Q	F	R	T	F	A	R	G	F	D	N	V	R	Q	G	D	E	L	D	V	P	A	Q	V	S	E	K	K	L	T	P	P	P	G	N	S	S	D	N	L	E	Q	Q	I	A	S	T	S	Q	Q	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	L	S	V	G	P	V	E	N	V	A	Q	L	V	T	Q	P	Q	L	R	D	R	L	W	W	P	G	A	L	L	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	A	K	A	K	A	L	K	D	Y	Q	H	V	X	A	Q	L
Template Known Secondary structure										S	B								T	T	T	T	T	T	S		G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																														.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	S	L	L	A	E	D	M	N	S	E	Q	A	A	N	M	A	R	G	W	A	S	S	Q	A	S	G	A	M	T	D	W	L	S	R	F	.	G	T	A	R	I	T	L	G	V	D	E	D	F	S	L	K	N	S	Q	F	D	F	L	H
Query Conservation																																						.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	W	E	A	E	A	D	D	D	V	A	.	.	.	.	.	.	.	.	.	.	.	A	T	I	K	S	V	R	Q	Q	L	L	N	L	N	I	T	G	R	L	P	V	K	L	D	P	D	F	V	R	V	D	E	N	S	N	P	P	L
Template Known Secondary structure								S						.	.	.	.	.	.	.	.	.	.	.										T	T	T								S					T	T					S	T	T	S	S		B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions