Job Description P76347 Confidence 26.99% Date Wed Jan 25 15:21:07 GMT 2012 Rank 186 Aligned Residues 77 % Identity 17% Template c3fidA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:putative outer membrane protein (lpxr); PDBTitle: lpxr from salmonella typhimurium Resolution 1.90 Å

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		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	E	N	D	T	R	F	A
Query Conservation
Alig confidence														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		E	K	Y	P	A	W	Q	D	Q	I	E	N	.	.	.	.	.	.	R	Y	G	Y	T	A	K	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	T	P	A	I	D	I	L	G	V	N	V	G	F	Y	P	E	V	S	A	V	G	.	.	.	.	.	.	.	G	N	L	F	Q	Y	L	G
Template Known Secondary structure					G	G	G	G	G		B			.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T														.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.															.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	F	T	W	Q	P	G	S	A	M	Q	K	Q	L	D	P	N	E	V	A	A	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	A	T	V	A	L	G	N	D	K	T	F	N	S	D	N	G	F	G	L	L	S	R
Template Known Secondary structure										S						T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions