Job Description P76347 Confidence 41.33% Date Wed Jan 25 15:21:07 GMT 2012 Rank 133 Aligned Residues 191 % Identity 11% Template c3efmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:ferric alcaligin siderophore receptor; PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis Resolution 2.33 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	W	Y	E	T	P	D	N	L	F	F	S	Q	H	T	L	H	R	T	D	E	R	T	Q	I	N	N	G	L	G	W	R	H	F	T	P	T	W	M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	L	S	S	N	G	Y	L	R	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	R	E	Y	R	I	K	N	Q	F	T	P	Y	A	G	L	T	Y	D	I	N	D	T	Y	T	A	Y	A	S	Y	T	E	I	F	Q	P	Q	N	A	R	D	T	S	G	G	I	L	P	P	I	K	S	K	S	Y	E	L	G	L	K	A	A	Y	L	E	G	R	L	N	T	S	A	A	L	F	Q	T	R	Q
Template Known Secondary structure																							S	S	S																	B		S	S	S		B																		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.													.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	.	.	.	.	.	.	.	.	.	.	.	.	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																													.	.	.
Template Sequence		D	N	L	A	Q	V	I	P	G	S	S	I	P	G	F	P	N	M	Q	A	S	R	A	A	S	G	A	K	V	E	G	I	D	L	E	A	S	G	Q	I	L	P	D	W	N	I	G	A	S	Y	T	H	F	T	T	K	D	A	S	.	.	.	G	N	P	I	N	T	N	H	P	R	S	L	F	K	L	Y	T	T
Template Known Secondary structure			S						T	T				T	T	S	S	S	S																								T	T															T	T	.	.	.	S		B				S	S		S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.				.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		356	.				.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure				.	.	.														.
Query SS confidence				.	.	.														.
Query Sequence		Y	T	.	.	.	P	F	P	L	M	T	F	S	A	E	Q	R	Q	.	G	K	Q	G	E	N	D	T	R	F	A	V	D	F	T	W	Q	P	G	S	A	M	Q	K	Q	L	D	P	N	E	V
Query Conservation				.	.	.														.
Alig confidence				.	.	.														.
Template Conservation
Template Sequence		Y	R	L	P	G	A	L	H	R	L	T	V	G	G	G	V	D	W	Q	S	R	M	Q	D	S	Y	A	L	V	S	L	M	A	R	F	D	F	N	K	K	L	S	A	T	L	N	V	N	N	L
Template Known Secondary structure					S	S	T	T	T	T																														T	T
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions