Job Description P76347 Confidence 73.55% Date Wed Jan 25 15:21:07 GMT 2012 Rank 68 Aligned Residues 177 % Identity 11% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																																						.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	T	P	D	N	L	F	F	S	Q	H	T	L	H	R	T	.	D	E	R	T	Q	I	N	N	G	L	G	W	R	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	T	W	M	S	G	I	N	F
Query Conservation																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	T	K	I	E	T	I	G	L	T	G	S	L	S	F	K	V	N	D	N	F	S	L	G	A	G	V	I	I	Q	R	T	S	G	F	V	S	Q	N	L	D	L	Y	A	S	A	A	N	S	P	G	M	G	G	I	P	F	P	A	S	N	S	S	A	L	M	R	V	K	V	D	N	T	S	P	G	F	F	A
Template Known Secondary structure		S																	S	S	S	S																												T	S	T	T	T		S	S				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.																				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	.	R	D	Y	L	K	L	S	S	N	G	Y	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W	D	V	R	A	E
Query Conservation																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		G	A	V	W	K	P	T	D	R	.	.	.	D	T	L	G	F	A	Y	H	A	K	I	R	N	K	L	K	G	H	Y	N	L	Y	D	H	D	G	G	L	T	E	G	A	I	E	G	G	T	P	G	L	A	Y	P	G	L	D	L	R	M	G	A	S	A	S	A	R	L	D	I	P	A	Y	A	S	L	D	W	V
Template Known Secondary structure							S	S	S	S	.	.	.											B														S	T	T								T	T						S	T	T					S										B
Template Predicted Secondary structure											.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.									.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	W	L	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	.	.	.	.	.	.	.	.	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	G	K	Q	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Q	F	N	D	R	L	S	L	G	A	S	A	T	W	T	E	W	S	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	N	T	W	T	L	A	V	G	G	D	Y	K	V	T	D	Q	W	T	M	R	A	G	V	A	Y	D	Q	T	P	T	H	N	A	T	R	D	P	R	I
Template Known Secondary structure					S	S	S												G	G	G									T	T																								S	S	S	S													S			T	T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
				375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	N	D	T	R	F	A	V	D	F	T	W	Q	P	G	S
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	D	G	D	R	Y	F	A	S	L	G	A	G	Y	R	F	Q	S
Template Known Secondary structure																		S	S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions