Job Description P76347 Confidence 66.46% Date Wed Jan 25 15:21:07 GMT 2012 Rank 78 Aligned Residues 105 % Identity 30% Template c2zwkA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:intimin; PDBTitle: crystal structure of intimin-tir90 complex Resolution 3.10 Å

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		2198	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.		.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		N	F	A	P	G	K	T	A	A	D	Y	E	F	S	S	S	A	S	.	W	V	D	V	D	A	T	G	K	V	T	F	K	N	V	G	S	N	S	E	R	I	T	A	T	P	K	S	G	G	P	S	Y	V	Y	E	I	R	V	K	S	W	W	V	N	A	G	E	A	F	M	I	Y	S	L	A	E	N	F	C	S
Query Conservation																				.
Alig confidence																				.																		.	.											.																				.
Template Conservation																																						.	.											.																				.
Template Sequence		K	L	K	A	S	G	G	D	G	T	Y	S	W	Y	S	E	N	T	S	I	A	T	V	D	A	S	G	K	V	T	L	N	G	K	G	S	.	.	V	V	I	K	A	T	S	G	D	K	.	Q	T	V	S	Y	T	I	K	A	P	S	Y	M	I	K	V	D	K	Q	.	A	Y	Y	A	D	A	M	S	I	C	K
Template Known Secondary structure					B		S	S	S	S							S		T	T	T					T	T	S						S	S	S		.	.								T	T	T	.											S									.										T	T
Template Predicted Secondary structure																																						.	.											.																				.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.
		2277	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	G	Y	T	L	P	R	A	N	Y	L	N	H	C	S	S	R	G	I	G	S	L	Y	S	E	W	G	D	M	G	H	Y	T	T	D	A	G	F	Q	S	N	M	Y	W	S	S	S	P
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.		.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.		.	.	.	.
Template Sequence		N	.	.	.	.	.	.	.	.	.	.	L	L	P	S	T	Q	T	V	L	S	D	I	Y	D	S	W	G	A	A	N	K	Y	.	.	.	.	.	S	.	.	.	.	H	Y	S	S	M	N
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.				S	S														G	G	G	S	.	.	.	.	.	T	.	.	.	.	T	S	S	S		S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.		.	.	.	.
Template SS confidence
		114											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.					.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions