Job Description P76347 Confidence 87.33% Date Wed Jan 25 15:21:07 GMT 2012 Rank 51 Aligned Residues 139 % Identity 12% Template c2o4vA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:porin p; PDBTitle: an arginine ladder in oprp mediates phosphate specific transfer across2 the outer membrane Resolution 1.94 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.
Query Sequence		M	S	G	I	N	F	F	F	D	H	D	L	S	R	Y	H	S	R	A	G	I	G	A	E	Y	W	R	D	Y	L	K	.	.	.	.	.	.	.	L	S	S	N	G	Y	L	R	L	T	N	W	R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W	D	V	R	A	E	S	W	L	P	A	W	P
Query Conservation																																	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																			.				.	.
Template Conservation																																																										.				.	.
Template Sequence		L	W	K	D	D	S	V	W	G	L	E	G	A	W	A	L	G	A	F	S	A	Q	A	E	Y	L	R	R	T	V	K	A	E	R	D	R	E	D	L	K	A	S	G	Y	Y	A	Q	L	A	Y	T	L	T	G	E	P	.	R	L	Y	.	.	K	L	D	G	A	K	F	D	T	I	K	P	E	N	K	E	I	G
Template Known Secondary structure		S																T	T																T	T																	T	T				.				.	.		T	T	T	T								S		T	T	T
Template Predicted Secondary structure																																																										.				.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370									.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	.	.	.	.	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S	A	E	Q	R	Q	.	.	.	.	.	.	.	.	G	K	Q	G	E	N	D	T	R	F	A	V	D	F	T	W	Q
Query Conservation																														.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	E	L	F	Y	R	Y	D	S	I	K	V	E	D	D	N	I	V	V	D	S	A	T	R	E	V	G	D	A	K	G	K	T	H	T	L	G	V	N	W	Y	A	N	E	A	V	K	V	S	A	N	Y	V	K	A	K	T	D	K	I	S	N	A	N	G	D	D	S	G	D	G	L	V	M	R	L	Q	Y	V
Template Known Secondary structure																	T	T			S			S	S	B		S	S																S	S	S														S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		388
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		411

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions