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Job DescriptionP76347
Confidence95.41%DateWed Jan 25 15:21:07 GMT 2012
Rank33Aligned Residues141
% Identity13%Templatec2jmmA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  TDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANG
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Template Sequence  KDNTWYTGAKLGWSQYSRENQLGAGAFGGYQVNPY. . . . . VGFEMGYDWLGRMPRKAQGV. . . . . . . . . . . . . . . . . . . Q
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   3......10.........20.........30....... ..40.........50....... .
 
   307..310......... 320.........330.........340........ .350...... ...360.........370......
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Query Sequence  WDVRAESWLPAWP. . HLGGKLVYEQYYGDEVALFDKDDRQSNPH. . . . AITAGLNY. . . . TPFPLMTFSAEQRQGKQGEN
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Template Sequence  LTAKLGYPKLGTDDLDIYTRLGGMVWRADTSDKDGNGYISAAEASVSPVFAGGVEYVIRRRITPEIATRLEYQWTNNASD
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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   377..380.........390.
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Query Sequence  DTRFAVDFTWQPGSA
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Template Sequence  NGMLSLGVSYRFGQG
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   139140.........150...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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