Job Description P76347 Confidence 57.09% Date Wed Jan 25 15:21:07 GMT 2012 Rank 96 Aligned Residues 24 % Identity 17% Template c2iouC_ PDB info PDB header:viral protein/membrane protein Chain: C: PDB Molecule:major tropism determinant p1; PDBTitle: major tropism determinant p1 (mtd-p1) variant complexed with2 bordetella brochiseptica virulence factor pertactin extracellular3 domain (prn-e). Resolution 3.16 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2264	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	M	I	Y	S	L	A	E	N	F	C	S	S	N	G	Y	T	L	P	R	A	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	G	A	W	Y	N	F	A	E	V	M	T	H	H	G	K	R	L	P	N	Y	N	E
Template Known Secondary structure		S	S														T		B
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions