Job Description P76347 Confidence 99.65% Date Wed Jan 25 15:21:07 GMT 2012 Rank 3 Aligned Residues 275 % Identity 18% Template c1f00I_ PDB info PDB header:cell adhesion Chain: I: PDB Molecule:intimin; PDBTitle: crystal structure of c-terminal 282-residue fragment of2 enteropathogenic e. coli intimin Resolution 1.90 Å

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		2059	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	Q	S	V	L	K	S	N	R	S	S	L	K	G	D	Y	T	D	S	A	E	L	R	L	V	L	H	D	I	S	G	N	P	I	K	V	S	E	G	M	E	F	V	Q	S	G	T	N	V	P	Y	I	K	I	S	A	I	D	Y	S	L	N	I	N	G	D	Y	K	A	T	V	T	G	G	G	E	G	I	A
Query Conservation
Alig confidence																																.																		.	.	.	.	.	.
Template Conservation																																.																		.	.	.	.	.	.
Template Sequence		A	S	I	T	E	I	K	A	D	K	T	T	A	V	A	N	G	Q	D	A	I	T	Y	T	V	K	V	M	K	G	.	D	K	P	V	S	N	Q	E	V	T	F	T	T	T	L	G	K	.	.	.	.	.	.	L	S	N	S	T	E	K	T	D	T	N	G	Y	A	K	V	T	L	T	S	T	T	P	G	K	S
Template Known Secondary structure										S		S				S	S	S													T	.	T				T	T								S	S	S		.	.	.	.	.	.		S		S						T	T	S									S	S
Template Predicted Secondary structure																																.																		.	.	.	.	.	.
Template SS confidence
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.		.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.							.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
		2139	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		T	L	I	P	V	L	N	G	V	H	Q	A	G	L	S	T	T	I	Q	F	T	R	A	E	D	K	I	M	S	G	T	V	S	V	N	G	T	D	L	P	T	T	T	F	P	S	Q	G	F	T	G	A	Y	Y	Q	L	N	N	D	N	F	A	P	G	K	T	A	A	D	Y	E	F	S	S	S	A	S	.	W	V
Query Conservation																																																																															.
Alig confidence																						.	.																																						.	.	.	.	.														.
Template Conservation																						.	.																																						.	.	.	.	.
Template Sequence		L	V	S	A	R	V	S	D	V	A	V	D	V	K	A	P	E	V	E	F	.	.	F	T	T	L	T	I	D	D	G	N	I	E	I	V	G	T	G	V	K	G	K	L	P	T	V	W	L	Q	Y	G	Q	V	N	L	K	A	S	.	.	.	.	.	G	G	N	G	K	Y	T	W	R	S	A	N	P	A	I	A
Template Known Secondary structure								T	T													.	.								T	T					T	T	T					S			S				T	T									.	.	.	.	.	S	T	T	S							S		T	T	T
Template Predicted Secondary structure																						.	.																																						.	.	.	.	.
Template SS confidence
		731	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750			.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.						.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
		2218	.	2220	.		.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		D	V	D	A	.	T	G	K	V	T	F	K	N	V	G	S	N	S	E	R	I	T	A	T	P	K	S	G	G	P	S	Y	V	Y	E	I	R	V	K	S	W	W	V	N	A	G	E	A	F	M	I	Y	S	L	A	E	N	F	C	S	S	N	G	Y	T	L	P	R	A	N	Y	L	N	H	C	S	S	R	G	I
Query Conservation						.
Alig confidence						.												.	.																																																								.	.	.	.	.	.	.
Template Conservation																		.	.																																																								.	.	.	.	.	.	.
Template Sequence		S	V	D	A	S	S	G	Q	V	T	L	K	E	K	G	T	.	.	T	T	I	S	V	I	S	S	D	N	Q	T	A	T	Y	T	I	A	T	P	N	S	L	I	V	P	N	M	S	K	R	V	T	Y	N	D	A	V	N	T	C	K	N	F	G	G	K	L	P	S	S	Q	N	E	L	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T							S	S	S		.	.								T	T	T											S																							T	T		B			S	S					.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																																								.	.	.	.	.	.	.
Template SS confidence
		804	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.			820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
		2297	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.		.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.					.	.	2350	.	.	.	.	.	.
Predicted Secondary structure																													.																									.	.	.	.
Query SS confidence																													.																									.	.	.	.
Query Sequence		G	S	L	Y	S	E	W	G	D	M	G	H	Y	T	T	D	A	G	F	Q	S	N	M	Y	W	S	S	.	S	P	A	N	S	S	E	Q	Y	V	V	S	L	A	T	G	D	Q	S	V	F	E	K	L	.	.	.	.	G	F	A	Y	A	T	C	Y	K
Query Conservation																													.																									.	.	.	.
Alig confidence																													.																									.	.	.	.
Template Conservation
Template Sequence		E	N	V	F	K	A	W	G	A	A	N	K	Y	E	Y	Y	K	S	S	Q	T	I	I	S	W	V	Q	Q	T	A	Q	D	A	K	S	G	V	A	S	T	Y	D	L	V	K	Q	N	P	L	N	N	I	K	A	S	E	S	N	A	Y	A	T	C	V	K
Template Known Secondary structure											G	G	G	S	G	G	G	T	T		S																T							T	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		875	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions