Job Description P76347 Confidence 31.15% Date Wed Jan 25 15:21:07 GMT 2012 Rank 167 Aligned Residues 137 % Identity 18% Template c1e40A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: tris/maltotriose complex of chimaeric amylase from b.2 amyloliquefaciens and b. licheniformis at 2.2a Resolution 2.2 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		R	S	A	P	E	L	D	N	D	Y	E	A	R	P	A	N	G	W	D	V	R	A	E	S	W	L	.	.	.	.	P	A	W	P	H	L	G	G	K	L	V	Y	E	Q	Y	Y	G	D	E	V	A	L	F	D	K	D	D	R	Q	S	N	P	H	A	I	T	A	G	L	N	Y	T	P	F	P	L	M	T	F	S
Query Conservation																												.	.	.	.
Alig confidence								.																				.	.	.	.							.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																														.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	T	Q	P	G	.	Q	S	L	E	S	T	V	Q	T	W	F	K	P	L	A	Y	A	F	I	L	T	R	E	S	G	Y	P	Q	V	.	.	.	.	.	.	.	.	F	Y	G	D	M	Y	G	T	K	G	D	S	Q	R	E	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	S	T	T	.	S	T	T						T	T	T											S	S	S	S					.	.	.	.	.	.	.	.											S	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																														.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.									.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.				.	.						430	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.			.	.	.	.	.
Query SS confidence																																																																.	.	.			.	.	.	.	.
Query Sequence		A	E	Q	R	Q	G	K	Q	G	E	N	D	T	R	F	A	V	D	F	T	W	Q	P	G	S	A	M	Q	K	Q	L	D	P	N	E	V	A	A	R	R	S	L	A	G	S	R	Y	D	L	V	D	R	N	N	N	I	V	L	E	Y	R	K	.	.	.	K	E	.	.	.	.	.	L	V	R	L	T	L	T	D
Query Conservation																																																																.	.	.			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.			.	.	.	.	.							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	H	K	I	E	P	I	L	K	A	R	K	Q	Y	A	Y	G	A	Q	H	D	Y	F	D	H	H	D	I	V	G	W	T	R	E	G	D	S	S	V	A	N	S	G	L	A	A	L	I	T	D	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T			S								S	S	S										T	T	S	T	T									S	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template SS confidence
																													380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	G	K	S	G	E	V	K	S	L	V	S	S	L	Q	T	K	Y	A	L	K	G	Y	N	V	E	A	T	A	L	E	A	A	G	G	K	V	V	T	T	G	K	D	I	L	V	T	L	P	A	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	P	G	G	A	K	R	M	Y	V	G	R	Q	N	A	G	E	T	W	H	D	I	T	G	N	R	S	E	P	V	V	I	N	S	E	G	W	G	E	F	H	V	N	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	S	S										G	G	G	T	T						T	T	S	S									T	T	S								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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