Job Description P25772 Confidence 100.00% Date Thu Jan 5 11:42:38 GMT 2012 Rank 6 Aligned Residues 280 % Identity 24% Template d1ta8a_ SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 1.80

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.														.	.
Query SS confidence																																																						.	.	.	.	.	.														.	.
Query Sequence		W	S	P	A	R	A	Q	E	E	I	S	R	L	Q	Q	Q	I	K	Q	W	D	D	D	Y	W	K	E	G	K	S	E	V	E	D	G	V	Y	D	Q	L	S	A	R	L	T	Q	W	Q	R	C	F	G	.	.	.	.	.	.	S	E	P	R	D	V	M	M	P	P	L	N	G	.	.	A	V	M	H	P	V	A
Query Conservation																																																						.	.	.	.	.	.														.	.
Alig confidence																																																						.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		L	T	L	T	A	A	T	T	R	A	Q	E	L	R	K	Q	L	N	Q	Y	S	H	E	Y	Y	V	K	D	Q	P	S	V	E	D	Y	V	Y	D	R	L	Y	K	E	L	V	D	I	E	T	E	F	P	D	L	I	T	P	D	S	P	T	Q	R	V	G	G	K	V	L	S	G	F	E	K	A	P	H	D	I	P
Template Known Secondary structure																											T	S	S			S	S																				G	G	G			T	T		G	G	G	G	G				B		S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		H	T	G	V	R	K	M	V	D	K	N	A	L	S	L	W	M	R	.	.	.	.	.	.	.	E	R	S	D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V	S
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Y	S	L	N	D	G	F	S	K	E	D	I	F	A	F	D	E	R	V	R	K	A	I	G	K	P	V	A	Y	C	C	E	L	K	I	D	G	L	A	I	S	L	R	Y	E	N	G	V	F	V	R	G	A	T	R	G	D	G	T	V	G	E	N	I	T	E	N	L	R	T	V	R	S	V	P	M	R	L	T
Template Known Secondary structure										S																S	S												S									T	T									T	T	S	S				B						T	T		T	T	S		S	B		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																						.													.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																						.													.	.	.	.
Query Sequence		G	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	.	.	.	.	.	.	.	.	G	I	N	A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S	D	T	L	.	N	S	L	G	V	F	V	W	A	W	P	D	.	.	.	.	G	P	Q	L	M	S	D	R	L
Query Conservation																											.	.	.	.	.	.	.	.																						.													.	.	.	.
Alig confidence				.																							.	.	.	.	.	.	.	.																						.													.	.	.	.
Template Conservation				.
Template Sequence		E	P	.	I	S	V	E	V	R	G	E	C	Y	M	P	K	Q	S	F	V	A	L	N	E	E	R	E	E	N	G	Q	D	I	F	A	N	P	R	N	A	A	A	G	S	L	R	Q	L	D	T	K	I	V	A	K	R	N	L	N	T	F	L	Y	T	V	A	D	F	G	P	M	K	A	K	T	Q	F	E	A	L
Template Known Secondary structure		S		.																										T	T					S	S										T		S	B						T	S										S			T	T				S	B
Template Predicted Secondary structure				.
Template SS confidence
		166	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																							.	.
Query SS confidence																																	.	.																							.	.
Query Sequence		K	E	L	A	T	A	G	F	T	L	T	Q	T	Y	T	R	A	V	K	N	A	D	E	V	A	R	V	R	N	E	W	.	.	W	K	A	E	L	P	F	V	T	D	G	V	V	V	R	A	A	K	E	P	E	S	.	.	R	H	W	L	P	G	Q	A	E	W	L	V	A	W	K	Y	Q
Query Conservation																																	.	.																							.	.
Alig confidence														.																			.	.																							.	.
Template Conservation														.
Template Sequence		E	E	L	S	A	I	G	F	R	T	N	P	.	E	R	Q	L	C	Q	S	I	D	E	V	W	A	Y	I	E	E	Y	H	E	K	R	S	T	L	P	Y	E	I	D	G	I	V	I	K	V	N	E	F	A	L	Q	D	E	L	G	F	T	V	K	A	P	R	W	A	I	A	Y	K	F	P
Template Known Secondary structure							T	T					T	.	T					S	S														T	G	G	G	S	S	S										S	B									B		S	S	S	B	S	S
Template Predicted Secondary structure														.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions