 |
Job Description | P25772 | Confidence | 92.86% | Date | Thu Jan 5 11:42:38 GMT 2012 |
Rank | 65 | Aligned Residues | 77 |
% Identity | 14% | Template | d1keaa_ |
SCOP info | DNA-glycosylase
| DNA-glycosylase
| Mismatch glycosylase
|
Resolution | 2.00 |
|
 |
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | |
|
|
|
. | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 540 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
W | H | Q | F | N | L | A | R | K | Q | P | F | T | R | W | V | M | A | M | G | I | P | L | T | R | A | A | L | N | A | S | D | E | R | S | W | S | Q | L | L | . |
. |
. |
. |
F | S | T | E | Q | F | W | Q | Q | L | P | G | T | G | S | G | R | A | R | Q | V | I | E | W | . |
. |
. |
. |
. |
. |
. |
K | E | N | A | Q |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |
|
|   |   |
|   | . | . | . | . |   |
|
|   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |
|
|   |   |
| . | . | . | . | . | . | . |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
F | E | D | I | L | K | T | P | K | S | E | I | A | K | D | I | K | E | I | G | L | S | N | Q | R | A | E | Q | L | K | E | L | A | R | V | V | I | N | D | Y | G | G | R | V | P | R | N | R | K | A | I | L | D | L | P | G | V | G | K | Y | T | C | A | A | V | M | C | L | A | F | G | K | K | A | A | M | V | D | A | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|  |  |  |  |  |  |  | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |
|  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
543 | . | . | . | . | . | . | 550 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | K | L | G | S | W | L |
Query Conservation |   |
  |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |
Template Sequence |   |
F | V | R | V | I | N | R | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|