Job Description P25772 Confidence 98.02% Date Thu Jan 5 11:42:38 GMT 2012 Rank 29 Aligned Residues 146 % Identity 14% Template d1fvia2 SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain ATP-dependent DNA ligase catalytic domain Resolution 2.00

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V	S	G	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	G	I	N
Query Conservation
Alig confidence																	.	.	.						.	.	.			.	.	.	.								.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.						.	.	.			.	.	.	.								.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		P	C	L	A	T	P	K	I	A	G	I	R	S	V	K	.	.	.	Q	T	Q	M	L	.	.	.	S	R	.	.	.	.	T	F	K	P	I	R	N	.	.	.	.	.	.	S	V	M	N	R	L	L	T	E	L	L	P	E	G	S	D	G	E	I	S	I	E	G	A	T	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S									S						.	.	.	S	S	S			.	.	.		T	.	.	.	.	T	S		B		S		.	.	.	.	.	.											S		T	T								T	T	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.						.	.	.			.	.	.	.								.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40				.	.					.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																														.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S	D	T	L	N	S	L	G	V	F	V	W	A	W	.	.	P	D	G	P	Q	L	M	S	D	R	L	K	E	L	A	T	.	.	.	.	.	.	.	.	.	.	.	A	G	F	T	L	T	Q	T	Y	T	R	A	V	K	N	A	D	E	V	A	R	V	R
Query Conservation																														.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.										.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.													.	.	.	.	.
Template Sequence		.	.	Q	D	T	T	S	A	V	M	T	G	H	A	.	.	.	.	.	K	F	S	Y	Y	W	F	D	Y	V	T	D	D	P	L	K	K	Y	I	D	R	V	E	D	M	K	N	Y	I	T	V	H	P	H	I	L	E	H	A	Q	V	K	I	I	P	L	I	P	V	E	I	N	N	I	T	E	L	L	Q	Y	E
Template Known Secondary structure		.	.									S				.	.	.	.	.											S	S		T	T	S																	G	G	G	G	G		S	S													S
Template Predicted Secondary structure		.	.													.	.	.	.	.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		N	E	W	W	K	A	E	L	P	F	V	T	D	G	V	V	V	R	A	A	K	E	P	E	S	R	H	W	L	P	.	G	Q	A	E	W
Query Conservation																																.
Alig confidence									.	.	.	.																				.
Template Conservation									.	.	.	.
Template Sequence		R	D	V	L	S	K	G	.	.	.	.	F	E	G	V	M	I	R	K	P	D	G	K	Y	K	F	G	R	S	T	L	K	E	G	I	L
Template Known Secondary structure							T	T	.	.	.	.			S						T	T					S	S	B			T	T	T	T	S	S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions