Job Description P25772 Confidence 100.00% Date Thu Jan 5 11:42:38 GMT 2012 Rank 10 Aligned Residues 278 % Identity 24% Template d1dgsa3 SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 2.90

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.														.	.	.
Query SS confidence																																																						.	.	.	.	.	.														.	.	.
Query Sequence		W	S	P	A	R	A	Q	E	E	I	S	R	L	Q	Q	Q	I	K	Q	W	D	D	D	Y	W	K	E	G	K	S	E	V	E	D	G	V	Y	D	Q	L	S	A	R	L	T	Q	W	Q	R	C	F	G	.	.	.	.	.	.	S	E	P	R	D	V	M	M	P	P	L	N	G	.	.	.	A	V	M	H	P	V
Query Conservation																																																						.	.	.	.	.	.														.	.	.
Alig confidence																																																						.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		M	T	R	E	E	A	R	R	R	I	N	E	L	R	D	L	I	R	Y	H	N	Y	R	Y	Y	V	L	A	D	P	E	I	S	D	A	E	Y	D	R	L	L	R	E	L	K	E	L	E	E	R	F	P	E	F	K	S	P	D	S	P	T	E	Q	V	G	A	R	P	L	E	P	T	F	R	P	V	R	H	P	T
Template Known Secondary structure																											T	T					S		S	S	S	S											T	T	S	S	G	G	G			T	T	S	G	G	G	G		S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		A	H	T	G	V	R	K	M	V	D	K	N	A	L	S	L	W	M	R	E	R	S	D	.	.	.	.	.	.	.	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.													.									.	.
Template Conservation																																												.									.	.
Template Sequence		R	M	Y	S	L	D	N	A	F	T	Y	E	E	V	L	A	F	E	E	R	L	E	R	E	A	E	A	P	S	L	Y	T	V	E	H	K	V	D	G	L	S	V	.	L	Y	Y	E	E	G	V	W	.	.	S	T	G	S	G	D	G	E	V	G	E	E	V	T	Q	N	L	L	T	I	P	T	I	P	R	R	L
Template Known Secondary structure											S											T	T	S	S	S		S											S					.					T	T			.	.						S	S	S				B		T	G	G	G	T	S	S	T	T	S		S	B
Template Predicted Secondary structure																																												.									.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.																						.											.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.																						.											.	.	.	.	.	.	.
Query Sequence		S	G	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	.	.	.	.	.	.	.	.	G	I	N	A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S	D	T	L	.	N	S	L	G	V	F	V	W	A	W	.	.	.	.	.	.	.	P	D	G	P	Q	L	M
Query Conservation																												.	.	.	.	.	.	.	.																						.											.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.																						.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	V	P	D	R	L	E	V	R	G	E	V	Y	M	P	I	E	A	F	L	R	L	N	E	E	L	E	E	R	G	E	K	V	F	K	N	P	R	N	A	A	A	G	S	L	R	Q	K	D	P	R	V	T	A	K	R	G	L	R	A	T	F	Y	A	L	G	L	G	L	G	L	E	E	S	G	L	K	S	Q
Template Known Secondary structure		S	S			S																										T					S	S										S		S	S							S									B		T	T	T	T	T	T	S					B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																							.	.
Query SS confidence																																					.	.																							.	.
Query Sequence		S	D	R	L	K	E	L	A	T	A	G	F	T	L	T	Q	T	Y	T	R	A	V	K	N	A	D	E	V	A	R	V	R	N	E	W	.	.	W	K	A	E	L	P	F	V	T	D	G	V	V	V	R	A	A	K	E	P	E	S	.	.	R	H	W	L	P	G	Q	A	E	W	L	V	A	W	K	Y	Q
Query Conservation																																					.	.																							.	.
Alig confidence																			.																		.	.																							.	.
Template Conservation																			.
Template Sequence		Y	E	L	L	L	W	L	K	E	K	G	F	P	V	E	H	C	.	Y	E	K	A	L	G	A	E	G	V	E	E	V	Y	R	R	G	L	A	Q	R	H	A	L	P	F	E	A	D	G	V	V	L	K	L	D	D	L	T	L	W	G	E	L	G	Y	T	A	R	A	P	R	F	A	L	A	Y	K	F	P
Template Known Secondary structure											T	T					S		.																				T	T	T	T	S	S	S										S	B	T						S		B		S	S		B	S	S
Template Predicted Secondary structure																			.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions