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Job DescriptionP25772
Confidence96.53%DateThu Jan 5 11:42:38 GMT 2012
Rank46Aligned Residues158
% Identity16%Templatec3s24F_
PDB info PDB header:hydrolase, transferaseChain: F: PDB Molecule:mrna-capping enzyme; PDBTitle: crystal structure of human mrna guanylyltransferase
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGIN
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Template Sequence  PYKVSWKADGTRYMMLIDGTNEVFMIDRD. . . . . NSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDRVNGQ. . . . . . . .
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   288.290.........300.........310...... ...320.........330.........340.........350....
 
   198.200.........210.........220..... ....230.........240.........250.........260.
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Query Sequence  ARAKVAGLMMRQDDSDTLNSLGVFVWAW. . . . . . PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVA. . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . AVPRYLIYDIIKFNSQPVGDCDFNVRLQCIEREIISPRHEKMKTGLIDKTQEPFSVRNKPFF
Template Known Secondary structure  ..................BTTB
GGGS
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   355....360.........370.........380.........390.........400.........410......
 
   262.......270.........280.........290.........300.........310...
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Query Sequence  . . RVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAE
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Template Sequence  DICTSRKLLAKEVSHEMDGLIFQPTG. KYKPGRCD. . . . . . DILKWKPPSLNSV
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   417..420.........430.........440.. .......450 .........460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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