Job Description P25772 Confidence 98.29% Date Thu Jan 5 11:42:38 GMT 2012 Rank 24 Aligned Residues 151 % Identity 13% Template c3qwuA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: putative atp-dependent dna ligase from aquifex aeolicus. Resolution 2.35 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V	S	G	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	G	I	N
Query Conservation
Alig confidence																							.								.														.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																							.								.														.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		P	F	W	V	E	E	K	V	D	G	Y	N	T	R	I	F	K	Y	G	D	N	.	Y	Y	A	L	S	R	G	.	G	F	I	C	P	F	T	T	D	R	L	P	D	.	.	L	I	D	L	R	I	L	D	E	N	P	D	L	V	I	C	A	E	V	A	G	P	E	N	P	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S									T	T		.						T	T	.	S		B											.	.											T	T										T	T		S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.								.														.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																.	.	.	.																														.	.	.
Query SS confidence																																.	.	.	.																														.	.	.
Query Sequence		A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S	D	T	L	N	S	L	G	V	F	V	W	A	W	P	D	.	.	.	.	G	P	Q	L	M	S	D	R	L	K	E	L	A	T	A	G	F	T	L	T	Q	T	Y	T	R	A	V	K	N	.	.	.	A	D	E	V	A	R	V	R	N	E	W	W	K	A
Query Conservation																																.	.	.	.																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																						.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	E	E	S	P	P	Y	V	K	E	D	V	Q	L	F	V	F	D	F	M	K	K	N	E	Q	G	F	L	S	Q	E	E	K	M	E	L	I	E	K	Y	N	L	P	H	V	E	I	L	G	R	F	T	A	S	E	E	G	I	K	K	I	K	E	I	L	K	R	F	N	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S				T	T			S	S											T	T			S															T			B									S	S																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		E	L	P	F	V	T	D	G	V	V	V	R	A	.	A	K	E	P	E	S	R	H	W	L	P
Query Conservation															.
Alig confidence			.	.	.	.									.
Template Conservation			.	.	.	.
Template Sequence		G	.	.	.	.	R	E	G	V	V	F	K	E	D	S	E	R	N	K	R	A	K	Y	I	T
Template Known Secondary structure		T	.	.	.	.									S	S	S	S
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		209					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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