Job Description P25772 Confidence 44.07% Date Thu Jan 5 11:42:38 GMT 2012 Rank 154 Aligned Residues 123 % Identity 15% Template c2izoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flap structure-specific endonuclease; PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex Resolution 2.9 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																															.	.	.	.																	.
Query SS confidence																																															.	.	.	.																	.
Query Sequence		L	T	C	Y	F	A	S	D	V	C	Q	E	Q	F	I	S	R	L	V	W	L	G	A	K	Q	V	L	G	L	D	G	I	G	E	A	G	W	R	A	L	H	Q	T	H	R	.	.	.	.	F	E	H	I	F	S	W	L	L	L	T	P	E	Q	L	Q	.	N	T	P	G	I	A	K	S	K	S	A	Q	L	W
Query Conservation																																															.	.	.	.																	.
Alig confidence																																															.	.	.	.																	.									.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		P	I	Y	V	F	D	G	S	N	I	M	V	E	E	S	K	K	L	L	R	A	M	G	I	P	I	V	Q	A	P	S	E	G	E	A	E	A	A	Y	L	N	K	L	G	L	S	W	A	A	A	S	Q	D	Y	D	A	I	L	F	G	A	K	R	L	V	R	N	L	T	I	Y	V	E	I	.	.	.	.	.	.
Template Known Secondary structure																								T							S	S												T	T	S	S	S					S	S	S					T	T		S					S	S							.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	F	N	L	A	R	K	Q	P	F	T	R	W	V	M	A	M	G	I	P	L	T	R	A	A	L	N	A	S	D	E	R	S	W	S	Q	L	L	F	S	T	E	Q	F	W	Q	Q	L	P	G	T	G	S	G	R	A	R	Q	V	I	E	W	K	E	N
Query Conservation
Alig confidence		.	.	.	.																		.	.	.	.	.	.	.													.
Template Conservation		.	.	.	.																		.	.	.	.	.	.	.													.
Template Sequence		.	.	.	.	K	P	E	L	I	E	T	E	I	L	L	K	K	L	G	I	T	.	.	.	.	.	.	.	R	E	Q	L	I	D	I	G	I	L	I	G	.	T	D	Y	N	P	D	G	I	R	G	I	G	P	E	R	A	L	K	I	I	K	K	Y	G	K
Template Known Secondary structure		.	.	.	.															T			.	.	.	.	.	.	.													.		S	S	S	T	T		S	T	T													S	S
Template Predicted Secondary structure		.	.	.	.																		.	.	.	.	.	.	.													.
Template SS confidence
						203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions