Job Description P25772 Confidence 94.25% Date Thu Jan 5 11:42:38 GMT 2012 Rank 59 Aligned Residues 82 % Identity 15% Template c2hvsA_ PDB info PDB header:ligase/dna/rna Chain: A: PDB Molecule:t4 rna ligase 2; PDBTitle: structure of t4 rna ligase 2 with nicked 5'-adenylated2 nucleic acid duplex containing a 2'-deoxyribonucleotide at3 the nick Resolution 2.50 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	R	K	M	V	D	K	N	A	L	S	L	W	M	R	E	.	.	.	R	S	D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	.	.	.	.	.	.	.	.	.	.	W	T	Q	K	V	S	L	I	S	A	V	P
Query Conservation																			.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	E	N	H	Y	N	S	K	F	I	E	K	L	Y	S	L	G	L	T	G	G	E	W	V	A	R	E	K	I	H	G	T	N	F	S	L	I	I	E	R	D	K	V	T	C	A	K	R	T	G	P	I	L	P	A	E	D	F	F	G	Y	E	I	I	L	K	N	Y	A	D	S	I	K	A	V	Q	D	I	M
Template Known Secondary structure						T	T											T	T	T	T		S										S									S	S							T	T					T	T				T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	V	S	G	P	L	A	N	S	T	L	Q	G	E	I	F
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		E	T	S	A	V	V	.	.	S	Y	Q	V	F	G	E	F	A
Template Known Secondary structure		T	T	T	T			.	.
Template Predicted Secondary structure								.	.
Template SS confidence
		87	.	.	90	.	.			.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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