Job Description P25772 Confidence 100.00% Date Thu Jan 5 11:42:38 GMT 2012 Rank 9 Aligned Residues 283 % Identity 23% Template c1zauA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: adenylation domain of nad+ dependent dna ligase from2 m.tuberculosis Resolution 3.15 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.														.	.	.
Query SS confidence																																																						.	.	.	.	.	.														.	.	.
Query Sequence		W	S	P	A	R	A	Q	E	E	I	S	R	L	Q	Q	Q	I	K	Q	W	D	D	D	Y	W	K	E	G	K	S	E	V	E	D	G	V	Y	D	Q	L	S	A	R	L	T	Q	W	Q	R	C	F	G	.	.	.	.	.	.	S	E	P	R	D	V	M	M	P	P	L	N	G	.	.	.	A	V	M	H	P	V
Query Conservation																																																						.	.	.	.	.	.														.	.	.
Alig confidence																																																						.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		Q	T	A	P	E	V	L	R	Q	W	Q	A	L	A	E	E	V	R	E	H	Q	F	R	Y	Y	V	R	D	A	P	I	I	S	D	A	E	F	D	E	L	L	R	R	L	E	A	L	E	E	Q	H	P	E	L	R	T	P	D	S	P	T	Q	L	V	G	G	A	G	F	A	T	D	F	E	P	V	D	H	L	E
Template Known Secondary structure									T	T																T	T	T				S	S		T																T	S	S	T	T			T	T		T	T	T	T		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		A	H	T	G	V	R	K	M	V	D	K	N	A	L	S	L	W	M	R	.	.	.	.	.	.	.	E	R	S	D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R	D	G	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	M	L	S	L	D	N	A	F	T	A	D	E	L	A	A	W	A	G	R	I	H	A	E	V	G	D	A	A	H	Y	L	C	E	L	K	I	D	G	V	A	L	S	L	V	Y	R	E	G	R	L	T	R	A	S	T	R	G	D	G	R	T	G	E	D	V	T	L	N	A	R	T	I	A	D	V	P	E	R	L
Template Known Secondary structure									B	S	S										G	G	G	T	T	T		S		S										S								G	G	G	B			B		B	B		T	T	S	S				B								S	S	S			S	B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		169	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.					.	.	230
Predicted Secondary structure				.	.	.	.	.																									.	.	.	.	.	.	.	.																						.													.	.	.	.
Query SS confidence				.	.	.	.	.																									.	.	.	.	.	.	.	.																						.													.	.	.	.
Query Sequence		S	G	.	.	.	.	.	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	.	.	.	.	.	.	.	.	G	I	N	A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S	D	T	L	.	N	S	L	G	V	F	V	W	A	W	P	D	.	.	.	.	G	P	Q
Query Conservation				.	.	.	.	.																									.	.	.	.	.	.	.	.																						.													.	.	.	.
Alig confidence				.	.	.	.	.																									.	.	.	.	.	.	.	.																						.													.	.	.	.
Template Conservation
Template Sequence		T	P	G	D	D	Y	P	V	P	E	V	L	E	V	R	G	E	V	F	F	R	L	D	D	F	Q	A	L	N	A	S	L	V	E	E	G	K	A	P	F	A	N	P	R	N	S	A	A	G	S	L	R	Q	K	D	P	A	V	T	A	R	R	R	L	R	M	I	C	H	G	L	G	H	V	E	G	F	R	P	A
Template Known Secondary structure				B	T	T	B				S									B												S		S	S	T	T	S				S	S										T		S	S							S			B					B					S	S				S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																							.	.																							.	.
Query SS confidence																																							.	.																							.	.
Query Sequence		L	M	S	D	R	L	K	E	L	A	T	A	G	F	T	L	T	Q	T	Y	T	R	A	V	K	N	A	D	E	V	A	R	V	R	N	E	W	.	.	W	K	A	E	L	P	F	V	T	D	G	V	V	V	R	A	A	K	E	P	E	S	.	.	R	H	W	L	P	G	Q	A	E	W	L	V	A	W	K	Y	Q
Query Conservation																																							.	.																							.	.
Alig confidence																				.																			.	.																							.	.
Template Conservation																				.
Template Sequence		T	L	H	Q	A	Y	L	A	L	R	A	W	G	L	P	V	S	E	.	H	T	T	L	A	T	D	L	A	G	V	R	E	R	I	D	Y	W	G	E	H	R	H	E	V	D	H	E	I	D	G	V	V	V	K	V	D	E	V	A	L	Q	R	R	L	G	S	T	S	R	A	P	R	W	A	I	A	Y	K	Y	P
Template Known Secondary structure		B										T	T	T						.					B													T	T	T	T		S	S		S	S											B					T	T	S		B		S	S	S	B	S	S
Template Predicted Secondary structure																				.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		307	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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