 |
Job Description | P25772 | Confidence | 90.46% | Date | Thu Jan 5 11:42:38 GMT 2012 |
Rank | 74 | Aligned Residues | 65 |
% Identity | 9% | Template | c1kdhA_ |
PDB info |
PDB header:transferase/dna | Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short |
PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
|
Resolution | 3.00 Å |
|
 |
  |   |
426 | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | L | D | G | I | G | E | A | G | W | R | A | L | H | Q | T | H | R | F | E | H | I | F | S | W | L | L | L | T | P | E | Q | L | Q | N | T | P | G | I | A | K | S | K | S | A | Q | L | W | H | Q | F | N | L | A | R | K | Q | P | F | T | R | W | V | M | A |
Query Conservation |   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |
| . |
|   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
T | S | V | F | G | V | G | L | K | T | A | E | K | W | F | R | M | G | . |
F | R | T | L | S | K | I | Q | S | D | K | S | L | R | F | T | Q | M | Q | K | A | G | F | L | Y | Y | E | D | L | V | S | C | V | N | R | P | E | A | E | A | V | S | M | L | V | K | E |
Template Known Secondary structure |   |
 | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T | . |
|
| S |  |  |  |  |  |  |
| S | S |
|
|
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | |
. | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|