 |
Job Description | P25772 | Confidence | 80.42% | Date | Thu Jan 5 11:42:38 GMT 2012 |
Rank | 104 | Aligned Residues | 46 |
% Identity | 22% | Template | c1k1qA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:dbh protein; |
PDBTitle: crystal structure of a dinb family error prone dna2 polymerase from sulfolobus solfataricus
|
Resolution | 2.80 Å |
|
  |   |
427 | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | D | G | I | G | E | A | G | W | R | A | L | H | Q | T | H | R | F | E | H | I | F | S | W | L | L | L | T | P | E | Q | L | Q | N | T | P | G | I | A | K | S | K | S | A | Q | L | W | H |
Query Conservation |   |
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
| . |
|   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   | . | . |
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
E | I | P | G | I | G | S | V | L | A | R | R | L | N | E | L | G | . |
I | Q | K | L | R | D | I | L | S | K | N | Y | N | E | L | E | K | I | . |
. |
T | G | K | A | K | A | L | Y | L | L | K |
Template Known Secondary structure |   |
T |
| T | T | S |
|  |  |  |  |  |  |  | T | T | T | T | . |
|
| B | G | G | G | G | G | G | S |
|  |  |  |  |  | T | T | . | . | S |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
. | . | 220 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|