Job Description P25772 Confidence 96.93% Date Thu Jan 5 11:42:38 GMT 2012 Rank 44 Aligned Residues 197 % Identity 16% Template c1cknA_ PDB info PDB header:capping enzyme Chain: A: PDB Molecule:mrna capping enzyme; PDBTitle: structure of guanylylated mrna capping enzyme complexed2 with gtp Resolution 2.50 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	D	G	V	Y	D	Q	L	S	A	R	L	T	Q	W	Q	R	C	F	G	S	E	P	R	D	V	M	M	P	P	L	N	G	A	V	M	H	P	V	A	H	T	G	V	R	K	M	V	D	K	N	A	L	S	L	W	M	R	E	R	S	D	L	W	V	Q	P	K	V	D	G	V	A	V	T	L	V	Y	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		V	V	G	E	S	R	D	D	I	V	A	K	M	K	D	L	A	M	D	D	H	K	F	P	R	L	P	G	P	N	P	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	R	K	D	F	E	K	L	.	.	K	Q	N	K	Y	V	V	S	E	K	T	D	G	I	R	F	M	M	F	F	T
Template Known Secondary structure																		T	T				S	S				S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						.	.			S										S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		136	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		D	G	.	.	.	K	L	N	K	A	I	S	R	G	N	G	L	K	G	E	D	W	T	Q	K	V	S	L	I	S	A	V	P	Q	T	V	S	G	P	L	A	N	S	T	L	Q	G	E	I	F	L	Q	R	E	G	H	I	Q	Q	Q	M	G	G	I	N	A	R	A	K	V	A	G	L	M	M	R	Q	D	D	S
Query Conservation				.	.	.
Alig confidence				.	.	.										.	.	.	.							.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.							.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	F	G	F	K	V	C	T	I	I	D	R	A	.	.	.	.	M	T	V	Y	L	L	.	.	.	.	.	.	P	F	K	N	I	P	R	V	L	F	Q	G	S	I	F	D	G	E	L	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure				T	T									T	T	.	.	.	.							.	.	.	.	.	.			T	T			T	T	G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.							.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																													.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.								.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		D	T	L	N	S	L	G	V	F	V	W	A	W	P	D	G	P	Q	.	.	.	.	.	.	L	M	S	D	R	L	K	E	L	A	T	A	G	F	T	L	T	Q	.	.	.	.	.	.	.	T	Y	T	R	A	V	K	N	A	D	E	V	A	R	V	R	N	E	W	W	K	A	E	L	P	F	V	T	D	G	V
Query Conservation																				.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	E	K	K	F	A	F	V	L	F	D	A	V	V	V	S	G	V	T	V	S	Q	M	D	L	A	S	R	F	F	A	M	K	R	S	L	K	E	F	K	N	V	P	E	D	P	A	I	L	R	Y	K	E	W	I	P	L	E	H	P	T	I	I	K	D	H	L	K	K	A	N	A	I	Y	H	T	D	G	L
Template Known Secondary structure		T	T	T	T													T	T				T	T	S													T	T	T					T	T	S	S	S										T	T																S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	A	A	K	E	P	E	S	R	H	W	L	P	G	Q	A	E	W	L	V	A	W	K	Y	Q	P	V	A	Q	V	A	E
Query Conservation
Alig confidence														.	.	.						.	.	.
Template Conservation														.	.	.						.	.	.
Template Sequence		I	I	M	S	V	D	E	P	V	I	Y	G	.	.	.	R	N	F	N	L	.	.	.	F	K	L	K	P	G	T	H	H	T	I
Template Known Secondary structure						S	S	S						.	.	.						.	.	.					S	T	T
Template Predicted Secondary structure														.	.	.						.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions