Job Description Q46890 Confidence 100.00% Date Thu Jan 5 12:35:32 GMT 2012 Rank 10 Aligned Residues 166 % Identity 23% Template c3m4rA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of the n-terminal class ii aldolase domain of a conserved2 protein from thermoplasma acidophilum Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	M	T	R	I	A	S	S	F	F	Q	R	G	Y	A	T	G	S	A	G	N	L	S	L	L	L	P	D	G	N	.	.	.	.	.	.	.	.	L	L	A	T	P	T	G	S	C	L	G	N	L	D	P	Q	R	L	S	K	V	A	A	D	G	E	W	L	S	G	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	V	V	Y	G	S	R	L	I	G	S	D	P	D	L	V	L	G	G	G	N	T	S	V	K	T	T	E	R	D	H	A	G	R	I	I	S	V	L	R	V	K	N	S	G	S	N	L	G	T	I	D	S	R	G	F	T	G	I	R	X	D	D	A	L	A	A	A	K	I	D	K	X	T	D	E	A	X	V
Template Known Secondary structure													T		T	T	T																T	T	S										B	T	T	S		G	G	G			G	G	G												G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
															75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	S	K	E	V	L	F	H	L	A	L	Y	R	N	N	P	R	C	K	A	V	V	H	L	H	S	T	W	S	T	A	L	S	C	L	Q	G	L	D	S	S	N	V	I	R	P	F	T	P	Y	V	V	M	R	M	G	N	V	P	L	V	P	Y	Y	R	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	L	K	K	S	X	V	N	P	S	E	P	S	P	S	V	E	T	F	L	H	A	F	L	P	.	.	.	.	.	Y	K	F	V	X	H	S	H	A	D	A	I	L	S	I	T	N	T	D	L	P	.	.	.	.	.	.	.	.	.	S	D	Q	I	A	K	I	L	G	N	V	V	V	L	P	Y	I	P	P
Template Known Secondary structure							T	B	S	S	T	T	S			B		T	T						T	S		.	.	.	.	.	S	S															T	S	S			.	.	.	.	.	.	.	.	.										S									S
Template Predicted Secondary structure																												.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	K	R	I	A	Q	D	L	A	E	L	A	A	D	N	Q	A	F	L	L	A	N	H	G	P	V	V	C	G	E	S	L	Q	E	A	A	N	N	M	E	E	L	E	E	T	A	K	L	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	T	L	A	K	E	V	X	N	C	F	K	K	G	I	D	G	I	V	L	R	K	H	G	L	L	T	F	G	D	T	G	K	E	A	Y	D	R	H	I	N	I	V	S	R	A	E	N	F	I
Template Known Secondary structure		S													T	T		S					T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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