Return to main results Retrieve Phyre Job Id

Job DescriptionQ46890
Confidence2.70%DateThu Jan 5 12:35:32 GMT 2012
Rank64Aligned Residues34
% Identity21%Templatec2q1fA_
PDB info PDB header:lyaseChain: A: PDB Molecule:chondroitinase; PDBTitle: crystal structure of chondroitin sulfate lyase abc from bacteroides2 thetaiotaomicron wal2926
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.. ...
Predicted Secondary structure 











.
Query SS confidence 






























.


Query Sequence  SDFAKVEQSLREEMTRIASSFFQRGYATGSA. GNL
Query Conservation     
      
 

    
 
   

     .


Alig confidence 






























.


Template Conservation                    
   


   

  

 
Template Sequence  EAGSPIRKEXRRKFLAXYDHITDQGVAYGSCWGNI
Template Known Secondary structure 
TT
T
STT

TTB
Template Predicted Secondary structure 


















Template SS confidence 


































   309310.........320.........330.........340...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions