|   |
13 | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
Y | I | A | Y | H | D | . |
. |
N | E | W | G | V | P | E | T | D | S | K | K | L | F | E | M | I | C | L | E | G | Q | Q | A | G | L | S | W | I | T | V | L | K | K | R | E | N | Y | R | A | C | F | H | Q | F | D | P | V | K | V | A | A | M | Q | E | E | D | V | E | R | L | V | Q | D | A | G | I | I | R | H | R | G |
Query Conservation |   |
  |   |   |
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Alig confidence |   |
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| . | . |
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| . | . |
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| . | . | . |
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Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
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|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
| . | . |
|   |   |   |
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|   |
|   |   |   |
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|   |   |   |
|   |   |   |
| . | . | . |   |   |   |
Template Sequence |   |
V | L | D | W | Y | D | K | Y | G | R | K | T | L | P | W | Q | I | D | K | T | P | Y | K | V | W | L | S | E | V | M | L | Q | Q | T | Q | V | A | T | V | I | P | Y | F | E | R | F | M | A | R | F | P | . |
. |
T | V | T | D | L | A | N | A | P | L | D | E | V | L | H | L | W | T | G | L | G | . |
. |
. |
Y | Y | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
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| S | G | G | G | S | S |
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|  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | . | . | S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | S |
| . | . | . |
| T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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| . | . | . |
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Template SS confidence |   |
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  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
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. | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
K | I | Q | A | I | I | G | N | A | R | A | Y | L | Q | M | E | Q | N | G | E | P | F | V | D | F | V | W | S | F | V | N | H | Q | P | Q | V | T | Q | A | T | T | L | S | E | I | P | T | S | T | S | A | S | D | A | L | S | K | A | L | K | K | R | G | F | K | F | V | G | T | T | I | C | Y | S | F | M | Q |
Query Conservation |   |
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|   |
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|   |
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|   |   |   |   |
|   |   |
|   |
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|   |   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
|   |   |
|   |   |
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|   |
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|   |
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Alig confidence |   |
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| . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|
|   |   |   |   |   |   |
|   |   |   |   | . | . | . |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|   |
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|   |   |
|
|   |
Template Sequence |   |
R | A | R | N | L | H | K | A | A | Q | Q | V | A | . |
. |
. |
T | L | H | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | F | P | E | T | F | E | E | V | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | P | G | V | G | R | S | T | A | G | A | I | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  | S | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|
|
| S |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | T | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . | 100 | . | . | |
|
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. | . | . | . | . | . | . | 110 | . | . | . | |
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. | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |