Job Description P05100 Confidence 30.18% Date Thu Jan 5 10:58:41 GMT 2012 Rank 42 Aligned Residues 135 % Identity 14% Template c2hnhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii alpha subunit; PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		G	W	V	S	Q	D	P	L	Y	I	A	Y	H	D	N	E	W	G	V	P	E	T	D	S	K	K	L	F	E	M	I	C	L	E	G	Q	Q	.	.	A	G	L	S	W	I	T	V	L	K	K	R	E	N	Y	R	A	C	F	H	Q	F	D	P	V	K	V	A	A	M	Q	E	E	D	V	E	R	L	V	Q	D
Query Conservation																																							.	.
Alig confidence																											.	.	.	.	.	.							.	.					.	.	.	.
Template Conservation																											.	.	.	.	.	.													.	.	.	.
Template Sequence		D	V	Q	W	Q	H	E	S	L	K	P	V	L	E	P	T	Y	G	I	I	L	Y	Q	E	Q	.	.	.	.	.	.	V	M	Q	I	A	Q	V	L	S	G	Y	T	.	.	.	.	L	G	G	A	D	M	L	R	R	A	M	G	K	K	K	P	E	E	M	A	K	Q	R	S	V	F	A	E	G	A	E	K	N
Template Known Secondary structure			S	S	S	B		G	G	G					G	G	G	T	T				B				.	.	.	.	.	.													.	.	.	.																																	T
Template Predicted Secondary structure																											.	.	.	.	.	.													.	.	.	.
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.							690	.	.	.	.	.	.	.	.	.	700	.					.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		A	G	I	I	R	H	R	G	K	I	Q	A	I	I	G	N	A	R	A	Y	L	Q	M	E	Q	N	G	E	.	.	.	.	.	.	.	.	.	.	.	.	P	F	V	D	F	V	W	S	F	V	.	N	H	Q	P	Q	V	T	Q	A	T	T	L	S	E	I	P	T	S	T	S	A	S	D	A	L	S	K	A	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	I	N	A	E	L	A	M	K	I	F	D	L	V	E	K	F	A	G	Y	G	F	N	K	S	H	S	A	A	Y	A	L	V	S	Y	Q	T	L	W	L	K	A	H	Y	P	A	E	F	M	A	A	V	M	T	A	D	M	D	N	T	E	K	V	V	G	L	V	D	E	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T																		T	T		B																																		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	R	G	F	K	F	V	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	M	G	L	K	I	L	P	P
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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