Job Description P05100 Confidence 68.66% Date Thu Jan 5 10:58:41 GMT 2012 Rank 18 Aligned Residues 49 % Identity 16% Template c1oxjA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	I	T	V	L	K	K	R	E	N	Y	R	A	C	F	H	Q	F	D	P	V	K	V	A	A	M	Q	E	E	D	V	E	R	L	V	Q	D	A	G	I	I	R	H	R	G	K	I	Q	A	I	I	G
Query Conservation
Alig confidence									.																																	.	.	.
Template Conservation									.																																	.	.	.
Template Sequence		L	W	L	K	S	L	R	.	L	H	K	Y	I	E	L	F	K	N	M	T	Y	E	E	M	L	L	I	T	E	D	F	L	Q	S	V	G	V	T	K	G	.	.	.	A	S	H	K	L	A	L	C	I	D
Template Known Secondary structure							T	T	.		G	G	G	G	G	G	G	T	T							T	T									T	T					.	.	.
Template Predicted Secondary structure									.																																	.	.	.
Template SS confidence
		603	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.				.	.	.	.	.	.	.	.	650	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions