Job Description P23862 Confidence 5.28% Date Thu Jan 5 11:40:03 GMT 2012 Rank 20 Aligned Residues 129 % Identity 15% Template d1gs9a_ SCOP info Four-helical up-and-down bundle Apolipoprotein Apolipoprotein Resolution 1.7

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		L	L	L	E	K	L	E	G	Q	L	A	T	L	R	Q	R	C	A	P	V	S	Q	F	.	.	.	A	T	L	S	A	R	F	D	R	H	L	F	Q	T	R	A	T	T	L	Q	A	C	L	D	E	A	G	D	N	L	A	A	L	R	H	A	V	E	Q	Q	Q	L	P	Q	V	A	W	L	A	E	H	L	A	A
Query Conservation																									.	.	.
Alig confidence																									.	.	.										.
Template Conservation																																					.
Template Sequence		L	A	L	G	R	F	W	D	Y	L	R	W	V	Q	T	L	S	E	Q	V	Q	E	E	L	L	S	S	Q	V	T	Q	E	L	R	A	.	L	M	D	E	T	M	K	E	L	K	A	Y	K	S	E	L	E	E	Q	L	T	P	V	A	E	E	T	R	A	R	L	S	K	E	L	Q	A	A	Q	A	R	L	G	A
Template Known Secondary structure																											S	S									.																	T	T	S						S
Template Predicted Secondary structure																																					.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		Q	L	E	A	I	A	R	E	A	S	A	W	S	L	R	E	W	D	S	A	P	P	K	I	A	R	W	Q	R	K	R	I	Q	H	Q	D	F	E	R	.	R	L	R	E	M	V	A	E	R	R	A	R	L	A
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		D	M	E	D	V	R	G	R	L	V	Q	Y	R	G	E	V	Q	A	M	L	G	Q	S	T	E	E	L	R	V	R	L	A	S	H	L	R	K	L	R	K	R	L	L	R	D	A	D	D	L	Q	K	R	L	A
Template Known Secondary structure																			T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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