Job Description P23862 Confidence 10.15% Date Thu Jan 5 11:40:03 GMT 2012 Rank 12 Aligned Residues 94 % Identity 14% Template c3pltB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:sphingolipid long chain base-responsive protein lsp1; PDBTitle: crystal structure of lsp1 from saccharomyces cerevisiae Resolution 2.90 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	A	A	Q	L	E	A	I	A	R	E	A	S	A	W	S	L	R	E	W	D	S	A	P	P	K	I	A	R	W	Q	R	K	R	I	Q	H	Q	D	F	E	R	R	L	R	E	M	V	A	E	R	R	A	R	L	A	R	V	T	D	L	V	E	Q	Q	T	L	H	R	E	V	E	A	Y	E	A	R	L	A
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		D	V	T	D	K	L	G	V	L	I	Y	E	L	G	E	L	Q	D	Q	F	I	D	.	.	.	.	K	Y	D	Q	Y	R	V	T	L	K	S	I	R	N	I	E	A	S	V	Q	P	S	R	D	R	K	E	K	I	T	D	E	I	A	H	L	K	Y	K	D	P	Q	S	T	K	I	P	V	L	E	Q	E	L	V
Template Known Secondary structure																								.	.	.	.																																					T	T	S				T	T	T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	R	H	A	L	E	K	I	E	N	R	L	A	R	L	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	E	A	E	S	L	V	A	E	A	Q	L	S	N	I	T	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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