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Job DescriptionP0ABD5
Confidence99.16%DateWed Jan 25 15:20:22 GMT 2012
Rank34Aligned Residues183
% Identity11%Templated2a7ka1
SCOP infoClpP/crotonase ClpP/crotonase Crotonase-like
Resolution2.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160........ .170.........180
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Query Sequence  VMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYP. . . . . . . . . . . . GVGAEERGQSEA
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Template Sequence  VRVITLDH. . . . . . . . PNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLRSEDIEEWIDR
Template Known Secondary structure 

........SSTT
B


TT



TTS
SB
BS
T

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   10....... ..20.........30.........40.........50.........60.........70.........80.
 
   181........190.........200.........210.........220....... ..230......... 240...... ...250.
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Query Sequence  IARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV. . . . . . ISPEGCASILWK. . SADKAPL. AAEAM
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Template Sequence  VIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAAILGFTHGFSTMQEIIYQCQ
Template Known Secondary structure  T

S

STTTSSTT


GGGGT





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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   252.......260.........270.........280.........290.........300.........310......
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Query Sequence  GIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSY
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Template Sequence  SLDAPRCVDYRLVNQVVE. . . . . . . . . . . . . SSALLDAAITQAHVMASYPASAFINTKRAVNKPF
Template Known Secondary structure 
B
T

S
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   163......170.........180 .........190.........200.........210....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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