Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 10 Aligned Residues 261 % Identity 17% Template c3u9rB_ PDB info PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit Resolution 1.50 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.										.
Query SS confidence																																																							.	.	.	.	.										.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	Q	.	.	.	.	.	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y	V	R	L	A	F	D	E	F
Query Conservation																																																							.	.	.	.	.										.
Alig confidence																																																							.	.	.	.	.										.
Template Conservation
Template Sequence		A	D	V	H	C	K	V	S	G	V	A	D	H	Y	A	E	D	D	D	H	A	L	A	I	A	R	R	C	V	A	N	L	N	W	R	K	Q	G	Q	L	Q	C	R	A	P	R	A	P	L	Y	P	A	E	E	L	Y	G	V	I	P	A	D	S	K	Q	P	Y	D	V	R	E	V	I	A	R	L	V	D	G	S
Template Known Secondary structure								T	T		S		S				S	S														T	S																	S	S		G	G	G					S		S	S	T	T	S				T					T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T	P	G	A
Query Conservation
Alig confidence												.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	D	E	F	K	A	L	F	G	.	.	T	T	L	V	C	G	F	A	H	L	H	G	Y	P	I	A	I	L	A	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	L	F	A	E	A	A	Q	K	G	A	H	F	I	E	L	A	C	Q	R	G	I	P	L	L	F	L	Q	N	I	T	G	F
Template Known Secondary structure		B					S	T	T	S	S	.	.	T	T									T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B																			T												B
Template Predicted Secondary structure												.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.														.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	.	.	.	.	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		M	V	G	Q	K	Y	E	A	G	G	I	A	K	H	G	A	K	L	V	T	A	V	A	C	A	R	V	P	K	F	T	V	L	I	G	G	S	F	G	A	G	N	Y	G	M	C	G	R	A	Y	D	P	R	F	L	W	M	W	P	N	A	R	I	G	V	M	G	G	E	Q	A	A	G	V	L	A	Q	V	K	R
Template Known Secondary structure				S						T	T																	S												T	T					T	T		G	G	G			S						T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.																				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	P	L	A	A	E	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D	V	L	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	A	E	R	A	G	Q	Q	L	G	V	E	E	E	A	K	I	K	A	P	I	L	E	Q	Y	E	H	Q	G	H	P	Y	Y	S	S	A	R	L	W	D	D	G	V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	Q	T	R	E	V	L	A	L	A	L	S	A	A	L	N	A	P
Template Known Secondary structure						T	T	T																								S							T	T	S	S	S		B			.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G													T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.														.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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