Job Description P0ABD5 Confidence 98.68% Date Wed Jan 25 15:20:22 GMT 2012 Rank 113 Aligned Residues 176 % Identity 15% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.
Predicted Secondary structure																																																							.	.	.														.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.														.	.	.	.	.	.	.	.
Query Sequence		V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T	P	G	.	.	.	A	Y	P	G	V	G	A	E	E	R	G	Q	S	.	.	.	.	.	.	.	.	E	A	I
Query Conservation																																																							.	.	.														.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																																						.	.	.														.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		V	A	L	I	T	I	D	R	.	.	.	.	.	.	.	.	P	D	A	R	N	A	V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H	A	E	H	P	E	W
Template Known Secondary structure										.	.	.	.	.	.	.	.	G	G	G	T	T		B																			T	T									S	S	S	S	B	S				B							T	T				S		S	S		G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.
Predicted Secondary structure																																																.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																																.	.	.	.	.	.																							.	.	.	.
Query Sequence		A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	.	.	.	.	.	.	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D	K	A	P	L	A	A	E	.	.	.	.	A	M
Query Conservation																																																.	.	.	.	.	.																							.	.	.	.
Alig confidence																																																.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		G	F	A	G	Y	V	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A	L	G	G	G	S	E	L	A	L	A	S	D	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V	A	L	E	L	V	L	T	G	E
Template Known Secondary structure			G	G	G	T	T	T				S	S								S	B			T									S	S						T	T						G	G	G	G	T	T	S			T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D	V	L	S	T	E	D	L	K	N	R	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	M	T	A	S	D	A	L	R	W	G	L	I	N	E	V	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	T	V	V	E	A	A	L	A	L	A	E	R	I	T	C	N	A	P	L	S	V	Q	A	S	K
Template Known Secondary structure												T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions