Job Description P0ABD5 Confidence 28.04% Date Wed Jan 25 15:20:22 GMT 2012 Rank 173 Aligned Residues 100 % Identity 24% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	.	.	R	F	K	M	P	I	I	T	F	I	D	T	P	G	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																													.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	N	K	I	L	C	C	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A
Template Known Secondary structure		T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.															50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
			168	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.						.	.	.	.	.
Query SS confidence		.						.	.	.	.	.
Query Sequence		.	P	G	V	G	A	.	.	.	.	.	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	V	G	D	K	V	N	M	L	Q	Y	S
Query Conservation		.						.	.	.	.	.
Alig confidence		.						.	.	.	.	.																									.
Template Conservation																																					.
Template Sequence		L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	.	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I	R	I	P	S	H
Template Known Secondary structure					T	T								S	S	S															T	T					.					T	T										T	T							S		S
Template Predicted Secondary structure																																					.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions