Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABD5
Confidence27.32%DateWed Jan 25 15:20:22 GMT 2012
Rank176Aligned Residues18
% Identity22%Templatec2vt1B_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structure of the cytoplasmic domain of spa40, the2 specificity switch for the shigella flexneri type iii3 secretion system
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150........
Predicted Secondary structure 



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Query Sequence  RKALRLMQMAERFKMPII
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Template Sequence  QCALAVRKYANEVGIPTV
Template Known Secondary structure  TT



Template Predicted Secondary structure 



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   284.....290.........300.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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