Job Description P0ABD5 Confidence 98.80% Date Wed Jan 25 15:20:22 GMT 2012 Rank 91 Aligned Residues 144 % Identity 18% Template c2f6iG_ PDB info PDB header:hydrolase Chain: G: PDB Molecule:atp-dependent clp protease, putative; PDBTitle: crystal structure of the clpp protease catalytic domain from2 plasmodium falciparum Resolution 2.45 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	.	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T	P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G
Query Conservation																						.
Alig confidence																						.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	R	I	I	Y	L	T	D	E	I	N	K	K	T	A	D	E	L	I	S	Q	L	L	Y	L	D	N	I	N	H	N	D	I	K	I	Y	I	N	S	P	G	.	.	.	.	.	.	.	.	.	.	G	S	I	N	E	G	L	A	I	L	D	I	F	N	Y	I	K	S	D	I	Q	T	I	S	F	G	L	V
Template Known Secondary structure			T	T						S		B	S																				S											.	.	.	.	.	.	.	.	.	.	B															S	S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.											.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		204	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	G	G	A	L	A	I	G	V	G	D	.	.	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D	K	A	P	L	A	A	E	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	A	P	R	L	K	E	L	K	L	I	D	S
Query Conservation														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	M	A	S	V	I	L	A	S	G	K	K	G	K	R	K	S	L	P	N	C	R	I	M	I	H	Q	P	I	Q	T	K	E	I	L	Y	L	K	K	L	L	Y	H	Y	L	S	S	F	T	N	Q	T	V	E	T	I	E	K	D	S	D	R	D	Y	Y	M	N	A	L	E	A	K	Q	Y	G	I	I	D	E
Template Known Secondary structure			T								T	S		T	T						T	T																														T												T													T	S		S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		267	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	P	E	P	L	G	G	A	H	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	E	T	K	L	P	H	P	Y	F	N
Template Known Secondary structure						S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions