Job Description P0ABD5 Confidence 98.65% Date Wed Jan 25 15:20:22 GMT 2012 Rank 116 Aligned Residues 136 % Identity 18% Template c2deoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	.	I	I	T	F	I	D	T	P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S
Query Conservation																																																.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																									.																		.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	V	Y	V	A	Q	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	I	T	S	Y	T	Y	D	Q	F	D	R	Y	I	T	I	A	E	Q	D	N	A	E	A	I	I	I	E	L	D	T	P	G	G	R	A	D	A	X	X	N	.	.	.	.	.	.	.	.	.	.	I	V	Q	R	I	Q
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	S																				T	T		S								B			S	S			S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30														.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.											.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.
Predicted Secondary structure													.	.	.																																.	.	.	.	.	.	.																						.
Query SS confidence													.	.	.																																.	.	.	.	.	.	.																						.
Query Sequence		R	L	G	V	P	V	V	C	T	V	I	.	.	.	G	E	G	G	S	G	G	A	L	A	I	G	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	.	.	.	.	.	.	.	G	C	A	S	I	L	W	K	S	A	D	K	A	P	L	A	A	E	A	M	G	.	I	I	A	P	R	L
Query Conservation													.	.	.																																.	.	.	.	.	.	.																						.
Alig confidence													.	.	.																																.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		Q	S	K	I	P	V	I	I	Y	V	Y	P	P	G	A	S	A	A	S	A	G	T	Y	I	A	L	G	S	H	L	I	A	X	A	P	G	T	S	I	G	A	C	R	T	N	Y	F	I	A	Y	I	K	S	L	A	Q	E	S	G	R	N	A	T	I	A	E	E	F	I	T	K	D	L	S	L	T	P	E	E	A
Template Known Secondary structure		T		S	S								S	T	T					T								T	S	S						T	T					S				T	T											T	T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	K	L	I	D	S	I	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Y	G	V	I	E	V	V	A	R
Template Known Secondary structure				T	T	S		S				S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions