Job Description P0ABD5 Confidence 98.70% Date Wed Jan 25 15:20:22 GMT 2012 Rank 110 Aligned Residues 171 % Identity 13% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	.	F	K	M	P	I	I	T	F	I	D	T	P	G	A	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L
Query Conservation																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	K	G	E	S	V	N	K	F	N	R	L	T	L	N	E	L	R	Q	A	V	D	A	I	K	A	D	A	S	V	K	G	V	I	V	S	S	G	K	D	V	F	I	V	G	A	D	I	T	E	F	V	E	N	F	K	L	P	D	A	E	L	I	A	G	N	L	E	A	N	K	I	F	S	D	F	E	D	L
Template Known Secondary structure				T	T	S	S	S		B																	T	T		T	T									S	S	S	S	S	B	B											T	S	S																					S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																						.	.	.	.	.	.																									.	.	.	.
Query SS confidence																																						.	.	.	.	.	.																									.	.	.	.
Query Sequence		G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	.	.	.	.	.	.	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D	K	A	P	L	A	A	E	A	M	.	.	.	.	G	I	I	A	P	R	L	K	E	L
Query Conservation																																						.	.	.	.	.	.																									.	.	.	.
Alig confidence																																						.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		N	V	P	T	V	A	A	I	N	G	I	A	L	G	G	G	L	E	M	C	L	A	A	D	F	R	V	M	A	D	S	A	K	I	G	L	P	E	V	K	L	G	I	Y	P	G	F	G	G	T	V	R	L	P	R	L	I	G	V	D	N	A	V	E	W	I	A	S	G	K	E	N	R	A	E	D	A	L	K	V
Template Known Secondary structure		S	S								S				T									S	S						T	T						G	G	G	G	G	T				T	T	T																								B								T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D	V	L	S	T	E	D	L	K	N	R	R
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	D	A	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	L	G	A	A	A	L	D	L	I	K	R	A	I	S	G	E	L	D	Y	K	A	K	R	Q
Template Known Secondary structure		T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T														S	S	S	S							G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions