Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 6 Aligned Residues 263 % Identity 21% Template c2a7sD_ PDB info PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis Resolution 2.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.														.	.	.	.	.	70	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		A	H	T	H	M	A	K	S	G	T	A	H	Y	A	A	S	G	E	Q	D	A	F	D	Y	V	R	E	L	L	S	Y	L	P	P	N	N	S	T	D	A	P	R	Y	Q	A	A	A	P	T	G	P	I	E	E	N	L	T	D	E	D	L	E	L	D	T	L	I	P	D	S	P	N	Q	P	Y	D	M	H	E	V
Template Known Secondary structure								T	S				S				S	S															S		S	S	T	T	S												S		G	G	G	S								G	G	G	T	S		S	S	T	T					T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		79	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	R	L	A	F	D	E	.	F	D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I
Query Conservation									.
Alig confidence									.										.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		I	T	R	L	L	D	D	E	F	L	E	I	Q	A	G	Y	A	.	.	.	.	Q	N	I	V	V	G	F	G	R	I	D	G	R	P	V	G	I	V	A	N	Q	P	.	.	.	.	.	.	.	.	T	H	F	A	G	C	L	D	I	N	A	S	E	K	A	A	R	F	V	R	T	C	D	C	F	N	I	P	I
Template Known Secondary structure						S	S	S						S	T	T	S		.	.	.	.	T	T									T	T										T	.	.	.	.	.	.	.	.	T	S	G	G	G		B																		T	T
Template Predicted Secondary structure																			.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.									.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		I	T	F	I	D	T	P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	.	.	.	.	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		V	M	L	V	D	V	P	G	F	L	P	G	T	D	Q	E	Y	N	G	I	I	R	R	G	A	K	L	L	Y	A	Y	G	E	A	T	V	P	K	I	T	V	I	T	R	K	A	Y	G	G	A	Y	C	V	M	G	S	K	D	M	G	C	D	V	N	L	A	W	P	T	A	Q	I	A	V	M	G	A	S	G	A
Template Known Secondary structure										B									T	T																	S																		T	T		G	G	G	T		S						T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		234	.	.	.	.	.	240																.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	I	L	W	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	A	P	L	A	A	E	A	M	G	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	F	V	Y	R	Q	Q	L	A	E	A	A	A	N	G	E	D	I	D	K	L	R	L	R	L	Q	Q	E	Y	E	D	T	L	V	N	P	Y	V	A	A	E	R	G	Y	V	D	A	V	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	H	T	R	G	Y	I	G	T	A	L	R	L	L	E
Template Known Secondary structure						T						T	T	T	S	S	S			T	T	S	S	T	T								T	T	T	S	S								T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T												T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.														.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		299	300
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		533	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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