Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 5 Aligned Residues 263 % Identity 23% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.											.
Query SS confidence																																																						.	.	.	.	.	.											.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	.	.	.	.	.	.	Q	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y	V	R	L	A	F	D	E
Query Conservation																																																						.	.	.	.	.	.											.
Alig confidence																																																						.	.	.	.	.	.											.
Template Conservation
Template Sequence		A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	Q	E	A	I	N	L	T	K	R	L	L	S	Y	L	P	S	N	N	M	E	E	P	P	Y	I	D	T	G	D	P	A	D	R	D	A	T	G	V	E	Q	I	V	P	N	D	A	A	K	P	Y	N	M	R	E	I	I	Y	K	I	V	D	N
Template Known Secondary structure								T	T				S				S	S															S		S	S	T	T	S						S									S	S		G	G	G	S	S		S	S	T	T													S	G	G
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T
Query Conservation		.	.
Alig confidence		.	.										.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		G	E	F	L	E	V	H	K	H	W	A	.	.	.	.	Q	N	I	I	V	G	F	A	R	I	A	G	N	V	V	G	I	V	A	N	N	P	.	.	.	.	.	.	.	.	E	E	F	G	G	S	I	D	I	D	A	A	D	K	A	A	R	F	I	R	F	C	D	A	F	N	I	P	L	I	S	L	V	D	T
Template Known Secondary structure		G						S	T	T	S	S	.	.	.	.	T	T									T	T										T	.	.	.	.	.	.	.	.	T	S	G	G	G		B																		T	T
Template Predicted Secondary structure													.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.									.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	V	.	.	.	.	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A	S	I	L	W	K
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.
Template Conservation
Template Sequence		P	G	Y	V	P	G	T	D	Q	E	Y	K	G	I	I	R	H	G	A	K	M	L	Y	A	F	A	E	A	T	V	P	K	I	T	V	I	V	R	K	S	Y	G	G	A	H	I	A	M	S	I	K	S	L	G	A	D	L	V	Y	A	W	P	T	A	E	I	A	V	T	G	P	E	G	A	V	R	I	L	Y	R
Template Known Secondary structure				B			S						T	T																	S																		T			G	G	G	T		S						T	T					S	S							T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		240	.												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	.	.	.	.	.	.	.	.	.	.	.	D	K	A	P	L	A	A	E	A	M	G	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D	V	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	I	Q	Q	A	S	N	P	D	D	V	L	K	Q	R	I	A	E	Y	R	K	L	F	A	N	P	Y	W	A	A	E	K	G	L	V	D	D	V	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	D	T	R	R	V	I	V	A	G	L	E	M	L	K	T	K
Template Known Secondary structure		T	S	S	S	S	S	S		S	S				T	T	T									S	S	S						T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G												S	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.														.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions