Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 12 Aligned Residues 279 % Identity 15% Template c1pixB_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutaconyl-coa decarboxylase a subunit; PDBTitle: crystal structure of the carboxyltransferase subunit of the2 bacterial ion pump glutaconyl-coenzyme a decarboxylase Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																																.
Query SS confidence																																	.	.	.	.	.																																.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	.	.	.	.	.	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	Q	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y	V	R	L	A	F	D	E	F
Query Conservation																																	.	.	.	.	.																																.
Alig confidence																																	.	.	.	.	.																																.
Template Conservation
Template Sequence		V	D	I	H	Y	T	E	T	G	F	M	R	E	V	Y	A	S	E	E	G	V	L	E	G	I	K	K	Y	V	G	M	L	P	K	Y	D	P	E	F	F	R	V	D	D	P	K	A	P	A	F	P	A	D	D	L	Y	S	M	V	P	L	N	D	K	R	A	Y	D	I	Y	N	V	I	A	R	L	F	D	N	S
Template Known Secondary structure						T	T	T	S			S	S				S	S															S					G	G	G	G	B	S	S						S	S		G	G	G					S		S	S	T	T											T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	.	.	.	.	.	.	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F
Query Conservation																																															.	.	.	.	.	.
Alig confidence												.	.																																		.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		E	L	H	E	Y	K	K	G	Y	G	.	.	P	E	M	V	T	G	L	A	K	V	N	G	L	L	V	G	V	V	A	N	V	Q	G	L	L	M	N	Y	P	E	Y	K	A	A	G	S	V	G	I	G	G	K	L	Y	R	Q	G	L	V	K	M	N	E	F	V	T	L	C	A	R	D	R	L	P	I	V	W	I
Template Known Secondary structure		B				S	S	T	T	S	S	.	.	T	T									T	T											S			T	T			T	T	S		T	T					T	T																				T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		I	D	T	P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	V	G	.	.	.	.	.	.	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	T	T	G	I	D	V	G	N	D	A	E	K	A	E	L	L	G	L	G	Q	S	L	I	Y	S	I	Q	T	S	H	I	P	Q	F	E	I	T	L	R	K	G	T	A	A	A	H	Y	V	L	G	G	P	Q	G	N	D	T	N	A	F	S	I	G	T	A	A	T	E	I	A	V	M	N	G	E	T	A	A
Template Known Secondary structure										S						T	T														T											S				T	T					T	T		T	T		T	T	T								T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	L	W	K	S	A	D	K	A	P	L	A	A	E	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		T	A	M	Y	S	R	R	L	A	K	D	R	K	A	G	K	D	L	Q	P	T	I	D	K	M	N	N	L	I	Q	A	F	Y	T	K	S	R	P	K	V	C	A	E	L	G	L	V	D	E	I	V	D	.	.	.	.	.	.	.	.	.	M	N	K	I	R	G	Y	V	E	A	F	T	E	A	A	Y	Q	N	P
Template Known Secondary structure															T	T																				T	T	S								T	S	S	S					.	.	.	.	.	.	.	.	.	G	G	G													T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.										.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		298	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	I	C	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		563	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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