Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 4 Aligned Residues 265 % Identity 22% Template c1on3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:methylmalonyl-coa carboxyltransferase 12s PDBTitle: transcarboxylase 12s crystal structure: hexamer assembly2 and substrate binding to a multienzyme core (with3 methylmalonyl-coenzyme a and methylmalonic acid bound) Resolution 1.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																																.
Query SS confidence																																	.	.	.	.	.																																.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	.	.	.	.	.	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	Q	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y	V	R	L	A	F	D	E	F
Query Conservation																																	.	.	.	.	.																																.
Alig confidence																																	.	.	.	.	.																																.
Template Conservation
Template Sequence		A	E	A	H	M	A	I	S	G	N	I	H	F	V	A	E	D	D	D	A	A	E	L	I	A	K	K	L	L	S	F	L	P	Q	N	N	T	E	E	A	S	F	V	N	P	N	N	D	V	S	P	N	T	E	L	R	D	I	V	P	I	D	G	K	K	G	Y	D	V	R	D	V	I	A	K	I	V	D	W	G
Template Known Secondary structure								T	T				S				S	S														T	S		S	S	T	T	S						S									T	T					S		S	S	T	T					T								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M	Q	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T	P	G	A
Query Conservation
Alig confidence												.	.																							.	.	.	.	.	.	.	.
Template Conservation												.	.																							.	.	.	.	.	.	.	.
Template Sequence		D	Y	L	E	V	K	A	G	Y	A	.	.	T	N	L	V	T	A	F	A	R	V	N	G	R	S	V	G	I	V	A	N	Q	P	.	.	.	.	.	.	.	.	S	V	M	S	G	C	L	D	I	N	A	S	D	K	A	A	E	F	V	N	F	C	D	S	F	N	I	P	L	V	Q	L	V	D	V	P	G	F
Template Known Secondary structure							S	T	T	S	S	.	.	T	T									T	T										T	.	.	.	.	.	.	.	.	T	T	G	G	G		B																		T	T												B
Template Predicted Secondary structure												.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.									.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	G	S	G	G	A	L	A	I	G	.	.	.	.	V	G	D	K	V	N	M	L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		L	P	G	V	Q	Q	E	Y	G	G	I	I	R	H	G	A	K	M	L	Y	A	Y	S	E	A	T	V	P	K	I	T	V	V	L	R	K	A	Y	G	G	S	Y	L	A	M	C	N	R	D	L	G	A	D	A	V	Y	A	W	P	S	A	E	I	A	V	M	G	A	E	G	A	A	N	V	I	F	R	K	E	I
Template Known Secondary structure										T	T																	S																	T	T	T		G	G	G	T		S						T	T					S	S										S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		243	.	.	.	.	.	.	250	.	.												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	P	L	A	A	E	A	M	G	.	.	.	.	.	.	.	.	.	.	.	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A	S	L	K	A	Q	L	L	A	D	L	A	D	L	D	V	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	D	D	P	D	A	M	R	A	E	K	I	E	E	Y	Q	N	A	F	N	T	P	Y	V	A	A	A	R	G	Q	V	D	D	V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	D	T	R	R	K	I	A	S	A	L	E	M	Y	A	T	K
Template Known Secondary structure			T	S	S	S																	S	S							T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G												G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.														.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions