Job Description P0ABD5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 27 Aligned Residues 272 % Identity 14% Template c1od4C_ PDB info PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain Resolution 2.7 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
Predicted Secondary structure																																																						.											.								.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.											.								.	.	.	.	.	.	.	.	.
Query Sequence		A	E	L	E	A	K	I	D	S	L	T	A	V	S	R	Q	D	E	K	L	D	I	N	I	D	E	E	V	H	R	L	R	E	K	S	V	E	L	T	R	K	I	F	A	D	L	G	A	W	Q	I	A	.	Q	L	A	R	H	P	Q	R	P	Y	.	T	L	D	Y	V	R	L	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.											.								.	.	.	.	.	.	.	.	.
Alig confidence								.																																														.											.								.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		T	Q	I	X	Y	N	.	N	G	V	S	H	L	T	A	V	D	D	L	A	G	V	E	K	I	V	E	W	X	S	Y	V	P	A	K	R	N	X	P	V	P	I	L	E	T	K	D	T	W	D	R	P	V	D	F	T	P	T	N	D	E	T	Y	D	V	R	W	X	I	E	G	R	E	T	E	S	G	F	E	Y
Template Known Secondary structure								.		T	S		S				S	S												G	G	G	S		S	S	T	T	S								S	S		S	S	S							B	T	T	B											B			T	T			B
Template Predicted Secondary structure								.
Template SS confidence
		1780	.	.	.	.	.		.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.
			82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.														130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	F	D	E	F	D	E	L	A	G	D	R	A	Y	A	D	D	K	A	I	V	G	G	I	A	R	L	D	G	R	P	V	M	I	I	G	H	Q	K	G	R	E	T	K	E	K	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	F	G	M	P	A	P	E	G	Y	R	K	A	L	R	L	M
Query Conservation		.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		G	L	F	D	K	G	S	F	F	E	T	L	S	G	W	A	.	.	K	G	V	V	V	G	R	A	R	L	G	G	I	P	L	G	V	I	G	V	E	T	R	T	V	E	N	L	I	P	A	D	P	A	N	P	N	S	A	E	T	L	I	Q	E	P	G	Q	V	W	H	P	N	S	A	F	K	T	A	Q	A	I
Template Known Secondary structure			S	S		T	T						S	T	T	S		.	.	T	T									T	T											S										T	T	S	S	S										T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		1859	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.			.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.
		148		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.
Predicted Secondary structure			.																																																								.	.												.	.	.	.	.
Query SS confidence			.																																																								.	.												.	.	.	.	.
Query Sequence		Q	.	M	A	E	R	F	K	M	P	I	I	T	F	I	D	T	P	G	A	Y	P	G	V	G	A	E	E	R	G	Q	S	E	A	I	A	R	N	L	R	E	M	S	R	L	G	V	P	V	V	C	T	V	I	G	E	G	.	.	G	S	G	G	A	L	A	I	G	V	G	.	.	.	.	.	D	K	V	N	M
Query Conservation			.																																																								.	.												.	.	.	.	.
Alig confidence			.																																																								.	.												.	.	.	.	.
Template Conservation
Template Sequence		N	D	F	N	N	G	E	Q	L	P	X	X	I	L	A	N	W	R	G	F	S	G	G	Q	R	D	X	F	N	E	V	L	K	Y	G	S	F	I	V	D	A	L	V	D	Y	K	Q	P	I	I	I	Y	I	P	P	T	G	E	L	R	G	G	S	W	V	V	V	D	P	T	I	N	A	D	Q	X	E	X	Y	A
Template Known Secondary structure							T	S																S						T	T																	S								T	T									G	G	G		G	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1937	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	Y	S	T	Y	S	V	I	S	P	E	G	C	A	S	I	L	W	K	S	A	D	K	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	E	A	M	G	I	I	A	P	R	L	K	E	L	K	L	I	D	S	I	I	P	E	P	L	G	G	A	H	R	N	P	E	A	M	A	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.
Template Sequence		D	V	N	A	R	A	G	V	L	E	P	Q	G	X	V	G	I	K	F	R	R	E	K	L	L	D	T	X	N	R	L	E	L	L	P	I	Y	G	Q	I	S	L	Q	F	A	D	L	H	D	R	S	S	R	X	V	A	K	G	V	I	S	K	E	L	E	.	.	.	.	.	.	.	.	.	W	T	E	A	R	R
Template Known Secondary structure			T	T					S	S										S										T	T																	T	T	S	S							T	T		S	S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		2017	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.										.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	A	Q	L	L	A	D	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	F	W	R	L	R	R	R	L	N	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		2121	.	.	.	.	.	.	.	.	2130	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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