Job Description P0AFV4 Confidence 100.00% Date Thu Jan 5 11:27:22 GMT 2012 Rank 3 Aligned Residues 121 % Identity 27% Template d2evra2 SCOP info Cysteine proteinases Cysteine proteinases NlpC/P60 Resolution 1.60

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		64	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		V	D	V	K	S	R	I	M	D	Q	Y	A	D	.	.	W	K	G	V	R	Y	R	L	G	G	S	T	K	K	G	I	D	C	S	G	F	V	Q	R	T	F	R	E	Q	F	G	L	E	L	P	R	S	T	Y	E	Q	Q	E	M	G	K	S	V	S	R	S	N	L	R	T	G	D	L	V	L	F	R	A	G	S
Query Conservation															.	.
Alig confidence															.	.																														.
Template Conservation																																														.
Template Sequence		K	K	L	L	A	E	V	I	A	F	T	Q	K	A	X	Q	Q	S	N	Y	Y	L	W	G	G	T	V	G	P	N	Y	D	C	S	G	L	X	Q	A	A	F	A	S	V	.	G	I	W	L	P	R	D	A	Y	Q	Q	E	G	F	T	Q	P	I	T	I	A	E	L	V	A	G	D	L	V	F	F	G	T	S	Q
Template Known Secondary structure																		S						T	T			S	S	S	S													T	T	.	T					S	S								S					G	G	G			T	T								S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.											.	.	.	.	.	.
Query SS confidence																							.	.	.	.											.	.	.	.	.	.
Query Sequence		T	G	R	H	V	G	I	Y	I	G	N	N	Q	F	V	H	A	S	T	S	S	.	.	.	.	G	V	I	I	S	S	M	N	E	P	.	.	.	.	.	.	Y	W	K	K	R	Y	N	E	A	R	R	V	L
Query Conservation																							.	.	.	.											.	.	.	.	.	.
Alig confidence																							.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	T	H	V	G	L	Y	L	A	D	G	Y	Y	I	H	S	S	G	K	D	Q	G	R	D	G	I	G	I	D	I	L	S	E	Q	G	D	A	V	S	L	S	Y	Y	Q	Q	L	R	G	A	G	R	V	F
Template Known Secondary structure											S	T	T								T	T	T	S		S							S	S	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions