Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFV4
Confidence2.89%DateThu Jan 5 11:27:22 GMT 2012
Rank60Aligned Residues35
% Identity17%Templated1gppa_
SCOP infoHedgehog/intein (Hint) domain Hedgehog/intein (Hint) domain Intein (protein splicing domain)
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.....
Predicted Secondary structure 




















Query SS confidence 


































Query Sequence  GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQF
Query Conservation             


 
        




 
 
  
Alig confidence 


































Template Conservation 

 
 



 


 


 

 

 
  
 

 
 
Template Sequence  GSIECIENIEVGNKVMGKDGRPREVIKLPRGSETM
Template Known Secondary structure  S
GGG

TT
BTTSS

Template Predicted Secondary structure 















Template SS confidence 


































   13......20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions