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Job DescriptionP0AFV4
Confidence100.00%DateThu Jan 5 11:27:22 GMT 2012
Rank5Aligned Residues123
% Identity33%Templatec3npfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90.........100.........110.........120.... .....130.......
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Query Sequence  RNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSV. . . . SRSNLRTGDLVLF
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Template Sequence  SLKQDVESIIETAYSXXGIPYLWAGTSSKG. VDSGLVRTVLFX. HDIIIPRDASQQAYVGEHIDIAPDFSNVKRGDLVFF
Template Known Secondary structure  T


STTTT
BB
TT
TT.

T.TT

SSTTSS


TT
TT

TT
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   171........180.........190.........200 .........210.. .......220.........230.........240........
 
   138.140.. .......150.........160.........170. ........180........
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Query Sequence  RAGST. . . . . . GRHVGIYIGNNQFVHASTSSGVIISSMNE. . . . . . PYWKKRYNEARRVLSRS
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Template Sequence  GRKATAERKEGISHVGIYLGNKQFIHALG. . DVHVSSXNPADQNYDEFNTKRLLFAVRFLPYI
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SSS

TTSS..BS
TTSTTB
T
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   250.........260.........270........ .280.........290.........300.........310
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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